Tachysurus fulvidraco (yellow catfish): 113642889
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Entry
113642889 CDS
T08119
Symbol
sned1
Name
(RefSeq) sushi, nidogen and EGF-like domain-containing protein 1 isoform X1
KO
K24470
insulin-responsive sequence DNA-binding protein 1
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
tfd04990
]
113642889 (sned1)
Domain-containing proteins not elsewhere classified [BR:
tfd04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
113642889 (sned1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
NIDO
hEGF
EGF_TEN
fn3
EGF_2
EGF_CA
cEGF
Ig_DSCAM-DSCAML_C
MAGP
EGF_3
Plasmod_Pvs28
Motif
Other DBs
NCBI-GeneID:
113642889
NCBI-ProteinID:
XP_027002456
LinkDB
All DBs
Position
5:complement(12816896..12857107)
Genome browser
AA seq
1348 aa
AA seq
DB search
MGRLRQLLLCLCTLLWLFMPSGVMPAVPLKDFYPFGQEQGDSQTIKQDDGGSGLVEISVA
FPFFGDRHTGLYVNNNGLVSFLREVSQFTPVAFPIAGDRRVVAPFWADVDNRQAGTVFYR
ESKDPAILKRATEDIHYYFPEFPSFTATWVLVATWHIVTFFGGSPVTPVNTFQVVLITDG
ELSFTIFQYHNVTWTTGMHASSGGDRSGLGGIAAQAGFNAGDGRRYFNIPGSRTADVVEV
ETTTNVGYPGRWVFRIDDAQVEVGSCNDSASVCPHLRPCLNGGRCIDDCITGNPSFTCSC
LAGFTGRTCQIDIDECSSYPCQNDGKCTDGVNSFTCYCPPGFTGVLCETDIDECQENPCL
NGARCIEGEGSFTCHCQAGYTGSVCETDINECASMPCVNGGVCEDKVNNYTCTCTANFTG
SWCETEIVITTNSSSTEIANQTASCEQEGCKTCKQISPGNYNCTCKPGYYGDQCEEECLC
QNGGACIDANGTCECPTGFIGLYCQFEVTQTPCSNSRPCPDGGPCLEYGGTYLCTCQTGI
DFEHDHKDFYPYVQPQSACDSSPCQNGGYCYEQDGGYTCECEHGYRGKNCEKVRLSMCAS
SPCRNGGSCKEEAGSYYCVCPYRFTGKHCEVGKPDPCASGPCMNGGTCFHYIGKYKCECP
GSFMGRHCEISKGASPALDGNDCGPPPKVRHAEVQFSSSSPGSLALYSCHPGYTTNPRAT
QSICSHGSWTQPPVCDEINECLSQPCMNGGTCRDRVASFLCECESGFTGQRCQTEQDGCE
SNPCQNGGVCRGYRRRHLCVCKEGYIGDRCQTLENPCVLQPCGNRGFCRSDRRGNYSCAC
RVGHTGRDCERDLLPPSGLHVLRVEDSEVELRWDEADINQNLISGFAITYAPIGRSPRKT
DFLERQHSTYVLQGLSPGQLYNISTYSIKRNSNSNDISQPAIALIRTRPRKVDQLQVVNV
SSSQVWLQWLMQAGWHAAVDLVRVSLVPSDGGGSRTAVLNATVTEYSFSSLLPGQMYTAD
VLTQSGLRSEDLPSTSHSSGPLHFWTKPLPPQNLSLSHVSSSTARVTWDRHPRSISDGFV
VNVTRGLTTRSRYLPDGTLSMYTIRDLSPGQHYRLALIAVRNTGHEQIHSEAQHLAFTTL
PLEEPQGKPERAQGGRDTSSRRSLNRTKLQHQTSDKTREHSEELPRYTELIDGRGRITAK
FTNSQRKAIRHRTKPEPIKLERMEETTNKISLALEIPEEVTKRKSEFQHDCRTQPCQNGG
TCIQSGDTFSCECATSFKGRQCELYCQRVKHPCTRLYSETKSVPVWEDGVCHYLYKRTYK
VQQDVCFREICEPVLSKKIPNRRTQRQQ
NT seq
4047 nt
NT seq
+upstream
nt +downstream
nt
atgggacgactgaggcaactgcttctctgcttgtgcacgctgctgtggctcttcatgcca
agcggcgtgatgccagctgtccccctgaaggacttttatccatttggacaagaacagggc
gactctcagaccatcaaacaggatgatggaggatcaggtctggtggagatctcagtggcg
ttccctttctttggcgatcgacacactgggctctatgtcaacaacaatggccttgtgtct
tttctaagggaagtgtcccagttcaccccagtggccttccccatcgctggagaccgcagg
gtagtagcgccgttctgggctgatgtagacaaccggcaagcggggacagtgttttacaga
gaaagcaaagatcctgcgatcctaaagagagctacagaagacatccactactatttccca
gaattcccctcattcacagcaacatgggtccttgttgccacttggcatattgtcactttt
tttggtggaagcccagttactccggtgaacacatttcaagtagtgctgattacagatggg
gagctctccttcacaatcttccagtaccacaatgtcacatggaccacaggaatgcatgca
agcagcgggggagatcgttcaggcctggggggcatcgcagcacaggcaggttttaatgct
ggcgacgggaggcgctatttcaacatcccagggtctcggactgctgatgtagtagaggtg
gagaccacaacaaacgtgggctatcccggccgctgggtctttcgcattgatgatgctcag
gtagaagtgggcagctgcaatgattcagcgtcagtctgtccacacctgaggccgtgtctg
aatggcggccgttgcattgatgattgcatcactggaaatccttctttcacttgctcatgc
ctggctggcttcactggccgtacgtgccagatagatattgacgagtgctcctcatatccc
tgtcagaatgatggcaagtgtacagatggagtgaacagctttacctgctactgtccacca
ggattcacaggagttctctgtgaaacagacattgacgagtgccaggagaatccatgcctc
aatggagcacgatgcatcgagggcgaagggagctttacctgccattgccaagcgggttac
accggatctgtatgtgagacagatataaacgagtgcgcgtccatgccatgtgtaaacgga
ggtgtgtgcgaggacaaggtgaataattacacatgcacctgtacagcaaacttcactggg
agctggtgtgagacagaaatagtaatcaccaccaattcctccagcactgaaattgcgaat
caaacagcttcttgtgagcaggaaggctgcaagacctgcaagcaaatcagccctggaaat
tacaactgcacctgcaagccaggctactacggagaccagtgtgaagaagagtgtctctgc
cagaatggaggtgcttgtattgatgcgaacggcacatgcgaatgtccaacgggtttcatc
ggcctctactgtcagtttgaggtcacacagacaccatgcagtaacagcaggccgtgtcca
gatgggggtccatgtttggaatatgggggcacatacctttgcacatgccaaacaggaatt
gactttgagcatgatcacaaagacttctacccttatgtacagccccaatcggcctgcgat
tcttcaccatgtcaaaatgggggttactgctatgagcaggatggaggctacacctgcgag
tgtgagcatggctacagagggaaaaactgtgaaaaagtcagattaagtatgtgtgcctct
agtccctgccgaaatggcgggtcctgtaaggaagaggcaggaagctactactgtgtgtgt
ccttaccggtttacaggaaaacactgtgaagtgggaaaaccagacccgtgtgcatctggc
ccgtgcatgaatggaggaacgtgtttccattacattggcaaatacaagtgcgagtgtcct
ggatccttcatgggaagacactgtgagatcagcaaaggagccagtccggctttggacgga
aatgattgtggtccccctccgaaggtgagacatgctgaggtacagttctcttcctccagc
cctggctccttggctctgtattcgtgccaccctggttacactaccaacccgagagccaca
cagagcatctgcagccatggttcctggactcagcctccagtctgtgatgaaataaacgag
tgcttgtctcagccgtgtatgaacggaggcacgtgtcgagaccgagtagcctccttcctg
tgtgagtgtgaatctggatttactggccaacgctgtcagacagagcaggatggatgcgaa
tccaatccctgccagaacggaggtgtgtgccgaggctacaggaggaggcatctgtgtgtg
tgtaaagagggctatattggggatcgctgccagactttggaaaacccgtgtgtattacag
ccgtgtgggaacagaggattctgtcgcagtgacaggagaggaaattacagctgcgcctgc
agggtgggacacacaggccgagactgtgagagagatctccttcctccatctggcctgcac
gtgctgagagttgaggatagtgaggtagaactacgatgggatgaagctgatattaatcag
aacctgatcagtggttttgccatcacttacgctccgattggacgcagcccacgaaaaaca
gacttcctggaaaggcagcattcaacctacgtgctgcagggcctaagtccaggacagctt
tacaacatctccacctactcaatcaaacgcaattccaacagcaacgacatcagccagccc
gcgattgccctcatacgcacaaggcctcggaaggtggatcagctgcaggtggtgaatgtc
tcctcctcccaggtgtggctgcagtggctaatgcaggcaggctggcatgctgctgtcgac
ctggtgcgggtatctctggtgccttcagatggcggcggctctcgcactgctgtcctgaat
gccactgttacagaatacagcttcagttctcttcttccaggtcaaatgtacactgcagat
gtgctgacacagagtgggcttcgttctgaggacctgccctccaccagccactcttctgga
cccctgcacttctggacaaaacctttgcctccacagaacctttctctatcccatgtgagc
tccagcactgcacgagtcacatgggaccggcatccaaggagcatctctgatggctttgtg
gtaaatgtgacacgtggcctaaccactcggagccgctacctgcctgatggaactctgagc
atgtacaccatccgtgatctgagccctgggcagcactatcggctcgccctgatcgctgtg
cgcaacacaggccatgagcagatacacagcgaggcccagcacttagccttcaccacacta
cctcttgaggagccacaggggaagcctgagagagctcagggaggtcgggacacctctagc
aggcgatctcttaatcgcactaaactacagcatcaaacttctgataaaaccagggaacat
tcagaagaactgcccagatacacagagctgatagacggtcgggggaggataacagccaaa
ttcaccaactcacagcgcaaagccattcgccatcgcacaaaacctgaaccaattaaatta
gagaggatggaggagacaaccaacaaaatcagtctggctctggagatccctgaagaagtg
acgaagaggaaaagtgagtttcagcatgactgcaggactcagccatgtcagaatgggggg
acctgcatacagagtggagacactttcagctgtgaatgcgctacaagttttaagggcaga
cagtgtgaactgtattgccaacgagtaaagcatccatgtacccgcctctattctgaaaca
aagagcgtgcctgtatgggaggatggagtctgccattatctatataaaagaacatataaa
gtacagcaagatgtttgttttagagagatctgtgaacctgtgctcagtaagaaaatcccc
aaccgcagaacacaaagacagcaatag
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