Tachysurus fulvidraco (yellow catfish): 113642919
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Entry
113642919 CDS
T08119
Name
(RefSeq) homeobox protein TGIF2 isoform X1
KO
K19553
homeobox protein TGIF2
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
113642919
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tfd03000
]
113642919
Transcription factors [BR:
tfd03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
113642919
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Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
DUF1005
Motif
Other DBs
NCBI-GeneID:
113642919
NCBI-ProteinID:
XP_027002531
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All DBs
Position
5:16992140..17000898
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AA seq
397 aa
AA seq
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MKSVKRAFEEEHSGETEFSAMSDSDPCEDDAYPLNLSTGARGASAKRRRRGNLPKESVQI
LRSWLYEHRFNAYPSEQEKLSLSGQTNLSISQICNWFINARRRLLPDLLRKDGKDPTQFT
ISRRASKSDSRSVGSASPEHSTPPLVPAPRPSVIRPAPTLDLSMLGNTATAILTGAGCLV
GSGLTGRDSGVQTLMQVDTRGLIKKESVNAPSSLTTIPGSSSSPSLGTMSPTVVLFNTPP
PTPPELCPHDFSDLKLLVDAALQRAAEQENQRQKEQPSARVPCSVPVSTSATEAPNRNME
KEKSRESLSSSIKSDSAPSLQEKAILPVSVPVLNASASPASEAGVSLPVVQQRVAGAVNF
QPNGVWSVVRPASPPPASVSHTWSSQHTLHAVREAVN
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgaaatctgtcaaaagagcatttgaagaggagcacagtggagagacagagttttctgcc
atgtcagacagtgatccctgtgaggatgatgcttacccactcaatctttccaccggtgcc
cgtggagcttctgctaagcgtcgccgccgggggaacctgccaaaagagtcggttcagatc
ctaaggagctggctatatgagcaccgttttaatgcctatccatctgagcaggagaagctt
agtctgtcaggacagaccaatctctctatctcacagatctgtaactggtttatcaatgca
cgacggcgacttcttcctgacctgcttaggaaggatggaaaggacccaactcagttcaca
atctcccgccgggccagcaaatctgacagccggtcagttggctccgcctcccctgaacac
tccacccctccacttgtcccggcacctcgtccctctgtcattcgccctgcccccacgttg
gaccttagcatgctgggtaatacagcaaccgccatcttgactggagctggctgcttagtg
ggatctggtctaacagggcgagacagtggagtccagaccctcatgcaagtggacactcgc
ggcctgatcaagaaagaaagcgtgaatgcaccctctagtctaactactattccaggctct
tcaagcagcccaagcctgggaacgatgagtcctacagtggtgctgttcaacacgccgccc
cccacacccccagagctctgcccacatgacttcagcgacctcaagctgcttgtcgatgca
gctctacagagagcagcagagcaagaaaaccagagacagaaggagcaaccttcagctaga
gtgccctgttctgttcctgtatccacttcagcaacagaggctccaaataggaacatggag
aaagaaaagagccgtgaaagcctgagctccagcatcaaatcagactctgctccaagcctg
caagagaaagccattctccccgtctctgtgcctgttttaaatgcttctgcttctcctgcc
agcgaagcaggcgttagtctgccggtggttcaacaaagagttgccggagcagtgaatttt
cagccaaatggcgtatggagtgtggtcagaccggctagcccacccccagccagcgtgtct
cacacctggagctcacagcacacactccatgctgtcagagaagcagtcaactga
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