Tachysurus fulvidraco (yellow catfish): 113643009
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Entry
113643009 CDS
T08119
Symbol
shmt2
Name
(RefSeq) serine hydroxymethyltransferase, mitochondrial
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd00260
Glycine, serine and threonine metabolism
tfd00630
Glyoxylate and dicarboxylate metabolism
tfd00670
One carbon pool by folate
tfd01100
Metabolic pathways
tfd01200
Carbon metabolism
tfd01230
Biosynthesis of amino acids
tfd01240
Biosynthesis of cofactors
tfd04981
Folate transport and metabolism
Module
tfd_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
113643009 (shmt2)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
113643009 (shmt2)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
113643009 (shmt2)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
113643009 (shmt2)
Enzymes [BR:
tfd01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
113643009 (shmt2)
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GFIT
Motif
Pfam:
SHMT
Motif
Other DBs
NCBI-GeneID:
113643009
NCBI-ProteinID:
XP_027002761
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Position
5:complement(19349141..19379628)
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AA seq
496 aa
AA seq
DB search
MLTLRHLVRPLCQRVSVCLRGQHSAAARAPDHERPWTGQDSLAQDDPEMWDLLQKEKDRQ
CRGLELIASENFCSRAALEAQGSCLNNKYSEGYPGKRYYGGAEVVDQIELLCQKRALTAF
DLDPSLWGVNVQPYSGSPANFAAYTAVLKPHERIMGLDLPDGGHLTHGYMSDVKRISATS
IYFESMPYKLNPKTGLIDYDQMELTAKLFRPRLIIAGTSAYARLIDYARIKKLCTELNAY
LLADMAHISGLVAAKAVPSPFEHADLVTTTTHKSLRGARAGLIFYRKGVRSVDKKGAQVM
YDLEDKVNFSVFPSLQGGPHNHAIAGVAVALRQANTPMFREYIAQVMKNAKAMADALLKK
GYTLVSGGTDNHLVLVDLRPQGMDGARAERVLELASITANKNTCPGDKSALTPGGLRLGA
PALTSRRFKEADFERVVDFLDEGFKIALDVKKKTKKLAEFKSFLLEDPETVARIGELRSR
VEAFARPFPMPGFSDH
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgctgacactgagacatttagtcaggcctctgtgccagcgtgtgagcgtgtgtctaaga
ggacaacactctgcagcagcacgggcacctgatcatgagcggccatggaccgggcaggac
agcctggcgcaggacgatcccgagatgtgggacctgctgcagaaagagaaagacagacag
tgtcgtgggctggaactcattgcttcagagaacttctgcagtcgagcagcactagaggcc
cagggctcctgcctcaataataagtattcagaaggatacccaggaaagaggtattatggc
ggtgcagaggtagtggatcagatcgagttgctgtgtcagaagcgcgctctcactgcgttt
gatctagacccctctctctggggagtcaacgttcagccgtactcgggctctccggctaac
tttgccgcctacacggccgtgctgaaaccccacgagcgtatcatgggtctggacctgcct
gacggaggacacctcacacatggctacatgtctgatgtgaagcggatctctgctacttca
atctactttgagtctatgccctacaaactcaatcctaaaacaggtctgatagactacgac
cagatggagctgactgcgaagctgtttcggccgaggctgatcatcgccggcaccagtgct
tatgcccgcctcatcgactatgctcgtatcaagaagctgtgtacagagttaaatgcatac
ctgctggcagatatggcccacattagtggtcttgtggctgctaaagctgttccctctcca
tttgagcatgctgacctcgtcaccacaaccacacacaaatccctcagaggagccagagcc
gggctgatattctaccgtaaaggcgtgcgctctgtggataaaaaaggtgctcaggtgatg
tatgaccttgaggacaaggtcaacttctctgtcttcccctctctccagggaggtccccat
aatcacgcaatcgcaggggtcgctgtggctctgagacaggccaacaccccaatgtttaga
gaatacattgcacaggtgatgaagaacgcaaaagccatggctgatgcattgctgaaaaaa
ggatacactcttgtgtcaggtgggactgataatcacctggtgctggtagatttgagacca
cagggaatggatggagcacgtgccgaaagggttttagagctggcgtccattacagccaac
aaaaacacctgccccggggacaagagcgcactcacacccggaggcctgagactgggtgcc
ccggctctgacctctcggaggtttaaagaggcagactttgagcgtgttgtggacttcttg
gacgaaggcttcaaaatcgctctggatgtcaaaaaaaagactaagaaattagcagagttt
aagagctttctactggaggaccccgagactgttgcacggatcggtgagctgcgcagtcgg
gttgaggcgttcgctcggccgttccccatgccaggcttctccgaccactag
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