Tachysurus fulvidraco (yellow catfish): 113643061
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Entry
113643061 CDS
T08119
Symbol
ddx27
Name
(RefSeq) probable ATP-dependent RNA helicase DDX27
KO
K13181
ATP-dependent RNA helicase DDX27 [EC:
5.6.2.7
]
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tfd03041
]
113643061 (ddx27)
03009 Ribosome biogenesis [BR:
tfd03009
]
113643061 (ddx27)
Enzymes [BR:
tfd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
113643061 (ddx27)
Spliceosome [BR:
tfd03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
113643061 (ddx27)
Ribosome biogenesis [BR:
tfd03009
]
Eukaryotic type
Pre-60S particles
Helicases
113643061 (ddx27)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
PRK
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
113643061
NCBI-ProteinID:
XP_027002888
LinkDB
All DBs
Position
5:20273776..20286313
Genome browser
AA seq
770 aa
AA seq
DB search
MLSDFDLIGTIVDDADVPEEEESGSDDEEKPIVLSKEKRALKRRGNGDFNADFEFEERDG
LYSGDWAMADVMSQLKKRKAPTTLDEKIEKVRKKRKTEEKEKGGSKSGTATKEKEEGEDA
EGDNDAEHDDDDVDGTDDAGEDGEDHTDEDEFNSGDEEVLKKADTIREKGKKGKRKAAEE
PEAFFEDASQYDENLTFPDMNLSRPLLKAITTMGFRQPTPIQKACVPVGLLGKDICACAA
TGTGKTAAFMLPVLERLIYKPRETQVTRVLVLVPTRELGIQVHTVARELAQFTNITTCLA
VGGLDLKSQEAALRLGPDVLIATPGRLIDHLHNTPSFELSQIEVLILDEADRMLDEYFEE
QMKEIIRMCSYQRQTMLFSATMSEEVKDLASVSLKQPVRIFVNSNTDVAPYLRQEFVRIR
PAREGDREAIVAALLTRTFQDHVMLFTQTKKQAHRMHILLGLMGLKVGELHGNLSQTQRL
ESLRRFKDEQIDILVATDVAARGLDIEGVKTVINFTMPNTVKHYVHRVGRTARAGKVGRS
VSLVGETERKMLKEIVRKAKTPVKARVIPQEVILKFRDLIEKLEKDVYAVLRWEREEKEM
VHSEAQINVAQKRLTQKPDEKQPARSWFQTHEERKKERMSKALQDFDLALRGKKKRAQFL
KDSKKKVLSAEERAQFEMLKSQMFAERSAKRDRKPKRARVVPEDEPKNTASKQKGGKPPK
KSVFDKELTNVSKKVLKQYRSGPSFEDRKRLGLANKKGGHFKSNAKFRRK
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atgttgtcagattttgatctgatcggaactattgtggacgacgcagatgtaccagaagaa
gaggaatcgggctcagatgatgaggagaagcccatcgtgttgagtaaggagaagagggcg
ctaaaaagacgaggcaatggagacttcaacgcagactttgagtttgaagagagagatggg
ctgtacagcggggactgggccatggcagatgttatgagccaacttaaaaagagaaaagca
cccaccacactggatgagaagatagagaaagtgcgtaagaagcgcaaaactgaggagaaa
gagaaaggaggcagcaaaagtggtacagcaaccaaggaaaaggaggagggagaggatgct
gaaggtgataatgatgctgaacatgatgatgatgatgttgatggcactgatgatgcaggt
gaagatggtgaggatcacactgatgaggatgagtttaattctggggatgaagaagttctc
aagaaagcagatacaataagagaaaaaggcaagaaaggaaaaagaaaggcagcagaagag
cctgaagccttctttgaagatgcctcgcagtatgatgaaaacctaacgttcccggacatg
aatctgtcaagaccactgctgaaggccatcaccaccatgggcttcagacagcctacacct
atccagaaagcgtgtgttccagtgggtttactggggaaggacatctgtgcttgtgctgct
actggaaccggtaagactgcagcgttcatgttgcctgtactggagcgtctcatttataag
ccgagagaaacgcaggtaacgcgtgtccttgtgctggtacccacccgagagctgggtatc
caagtgcacactgtagcacgtgagctggctcagttcaccaacatcaccacctgcttggct
gtgggcggcttggacctgaaatctcaagaggcagcgctgaggctggggcctgacgtcctg
atcgccacgcctggccgcttgatcgatcacttacacaacacgccgtcttttgagcttagt
caaatcgaggtgcttattctggatgaggctgacaggatgttggatgaatatttcgaggag
cagatgaaggagattatccggatgtgctcttatcagagacagactatgttgttctctgca
accatgagtgaagaggtgaaggatctggcctcagtgtcactgaagcaaccagtgcgaatc
tttgtgaacagtaacacagatgtggctccatacctcagacaggaatttgtaaggattcga
ccagccagagaaggagaccgagaggctatagttgcagcgctcctcacacgcacctttcag
gatcatgtcatgttgttcacccagactaagaaacaggcccaccgcatgcacatcctcctc
ggcctcatggggttaaaggttggagagctgcatggcaacctgtctcagacacaaagactg
gagagtctcaggcgatttaaagatgagcagattgacatcctggtggccacagatgtagca
gccagaggtctggatattgaaggagtcaaaacagttataaacttcaccatgccaaacaca
gtgaagcattatgtgcacagagtgggccgcacagcgcgagcagggaaagttggtcgctcc
gtgtcgctggtcggagaaaccgagaggaagatgctgaaggagatcgtcagaaaagccaaa
actcctgttaaagctcgcgttattcctcaggaggtgattctgaagttcagagatctgatt
gagaagttagagaaggatgtatatgctgtcttacgttgggagagagaagagaaagagatg
gtgcattcagaagcacagattaatgtggctcagaagaggctgacacagaaaccagatgag
aaacaaccagcaaggtcatggttccaaacccatgaggagaggaagaaggagcgaatgagc
aaagcacttcaggacttcgacttggccttaagggggaagaagaagcgtgctcagttcttg
aaagacagcaagaagaaagtgttgtcggctgaagaaagagctcaatttgaaatgcttaag
tctcagatgtttgctgagcgttctgcaaaacgtgaccgcaagccgaagagagccagagtt
gtgccagaagatgagcccaaaaacacagcatcaaaacaaaaaggtggaaaacctccgaag
aagtctgtgtttgacaaggagctcactaacgtcagcaagaaagtcctgaagcaatacaga
tccgggccttcctttgaggacagaaaaagactaggccttgcgaataagaaaggaggacac
tttaaatccaatgccaagttcaggaggaagtga
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