Tachysurus fulvidraco (yellow catfish): 113643077
Help
Entry
113643077 CDS
T08119
Symbol
sdc4
Name
(RefSeq) syndecan-4
KO
K16338
syndecan 4
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd04512
ECM-receptor interaction
tfd04514
Cell adhesion molecule (CAM) interaction
tfd04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
113643077 (sdc4)
04514 Cell adhesion molecule (CAM) interaction
113643077 (sdc4)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
113643077 (sdc4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
tfd00535
]
113643077 (sdc4)
Proteoglycans [BR:
tfd00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
113643077 (sdc4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Syndecan
Holin_BhlA
Motif
Other DBs
NCBI-GeneID:
113643077
NCBI-ProteinID:
XP_027002925
LinkDB
All DBs
Position
5:24503569..24511690
Genome browser
AA seq
189 aa
AA seq
DB search
MLKVSFVLVLLAATAVAESVRETETWMPPKAGESHDDLDSSGDFVFPNEEKTVDDEDDNE
DVEDYDDMSGSGDSETIINEIYKPEEIDNRIRDIEPSGQPHPTVNEIELVRQNEVGHHPS
VQLSHAGEQNIFNKTEVLAAVIAGGAVGLLFAVLLILLLVYRMKKKDEGSYDLGKKPIYK
KAPTTEIYA
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaagtgtccttcgtgttggttttattggctgctactgccgtcgccgagtcggta
cgagagacagaaacatggatgcctccaaaggctggggaatcacatgatgacctggactca
tctggtgatttcgtttttcctaatgaggaaaaaacagttgatgacgaggacgataatgag
gacgttgaagactatgatgatatgtcaggttctggtgatagcgagacgataataaatgaa
atctataagcctgaagaaattgataacagaatccgagacatagagccctcgggtcagcct
cacccaacagttaatgagattgagctggtgagacagaacgaagttggtcaccatcccagt
gtccagctgtctcatgcaggagaacagaacatctttaacaaaactgaagtgcttgccgct
gttattgctggtggtgctgttgggctgctttttgctgtgcttctcatccttctccttgtt
tatcgcatgaagaaaaaggacgaaggcagctacgatttgggcaagaaacctatttacaag
aaagctccaactaccgagatctacgcatga
DBGET
integrated database retrieval system
