Tachysurus fulvidraco (yellow catfish): 113643113
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Entry
113643113 CDS
T08119
Symbol
cntn4
Name
(RefSeq) contactin-4 isoform X1
KO
K06762
contactin 4
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tfd04515
]
113643113 (cntn4)
Cell adhesion molecules [BR:
tfd04515
]
Immunoglobulin superfamily
Contactins
113643113 (cntn4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
V-set
Ig_5
Sp38
Ig_4
Ig_C17orf99
Pur_ac_phosph_N
V-set_CD47
C2-set_2
Tissue_fac
fn3_2
NDNF
Nuc_sug_transp
Motif
Other DBs
NCBI-GeneID:
113643113
NCBI-ProteinID:
XP_027002977
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All DBs
Position
5:24118625..24265149
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AA seq
1028 aa
AA seq
DB search
MKLLWKLLVLQSFMGYLAVDNVLQAPIITKQPGSIVFPVDSLEKSQEVVFSCEAQGQPPP
FYRWKLNGTSIDPTFDSRYTLFGGNLRITQLNKDQDSGTYQCFASNSFGTIVSRKASLTF
AYLENFRTHRRSAVSVREGQGVVLLCGPPPHSGALTFSWIFNEYPSFVKQDSRRFVSQET
GNLYIAKVEPSDVGNYTCVVTNTVTKTHVHGPPTPLILRTDGIMGEYEPKIEVQFPELVQ
VAQGATVKLECFALGNPVPSIIWKRADGIPFSRKVDMRKASGILEIPYFEQDDAGTYECV
AENSKGRNSVQGKLSFYAPPQMIEKPQDMQKAIDDSLVWECMAIGKPKPSYRWMKNGENL
EPTEERVQVVNGALSINRLVLSDAGMYQCVAGNKYGEVYSNAELRVIAVAPDFGANLLKS
HILVKEGGDVLIDCKPKMSPRGLITWKKGNEALRENSRMTVLESGSLRISNAMKSDAGLY
TCVARNQFGVASSSGTMMVKEATVITTPPSTLDVTVGESIVLPCQVTHDPSLELKFTWFF
NEQLIHFGSHGGYFEKVGSHSSGDIMIRNIQMKHAGKYTCAVQTKVDSSSVATDLIVRGP
PGPPTSIHVEELTDTTATLSWKPGPDNHSPINAYTIQARTPFSLGWQAVATVPEEVGGRR
LTATVIELSPWVEYEFRVVGINALGTGEPSKPSKQVRTKDTLPKVAPANVSGGGGSRSEL
VITWEPVPEELQNGPGFGYVVAFRPYGATGWMQAAVPSAEASKYIFKNESIQPFSKFQVK
VGVYNNKGEGPFGPVVTIYSGEEEPARAPTRVRVQSLSASELEVTWKTLPWSTNRRRVLG
YELRYWEKKEKEDMASVLRTVGNRTSAIIQGLKGSRTYYITVRAYNSAGAGPPSAAVNVT
TKKPPPSQPPVKVMWNTSNSKIILNWEQVKALENESEVMGYKVLYKQNRHSRPRVMETNT
TSVELSLPPDEEYIIQIKPFGEGGEGSSSKQITIPRISGPNAIGSASSVSTLSALSTIAL
SLTARTSL
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atgaagttgctatggaaactactggtactgcagtcattcatggggtatctcgcagtggac
aatgtactgcaggctcccattatcaccaagcagcctggcagcatcgtattcccagtggac
tctttggagaaaagccaagaagttgtgtttagttgtgaagctcaaggacagccaccaccg
ttttacaggtggaagctcaatggaaccagcattgatccaacatttgattcacgctacacc
ctctttggtggaaacctccgcatcacccagttgaacaaagaccaggactctgggacctac
caatgctttgcctccaattcatttgggaccatcgtaagccgcaaggccagccttaccttt
gcatatctggaaaacttcagaactcatcgaagaagtgcagtgtctgtgagggagggacaa
ggggtggtgcttctgtgtggcccacctcctcactcaggagccctgacgttcagctggatt
tttaatgagtacccatcattcgtaaagcaggattcacgacggttcgtgtctcaggaaaca
ggaaacctgtacattgccaaggtggagccgtctgatgtgggaaactacacatgtgtcgtc
accaatactgtcacaaaaacgcatgttcatggcccacccactcctcttatactgcgtact
gatggtattatgggagaatatgaaccaaagattgaagtacaatttccagaactggtccag
gtggctcaaggtgcaactgtgaaacttgagtgctttgctttgggaaatcctgtcccttct
ataatatggaagcgagcagacggcatcccattctcccgtaaagtggacatgaggaaggcc
agtggcatcctggagattccatactttgaacaggatgatgccggcacgtatgagtgtgtt
gctgagaactccaaagggaggaactcggtgcagggcaagctttcgttctatgctcctcca
cagatgattgaaaaaccacaggacatgcagaaggccattgatgactctctagtgtgggag
tgtatggccatagggaaacccaaaccctcctataggtggatgaagaatggagaaaatttg
gaacctacagaggaaagggtacaggtggttaatggtgccctgtctataaatcgcttggtg
ttgtccgatgccggaatgtaccagtgtgtggctgggaacaaatatggggaggtgtactcc
aacgcagagctcagagtgattgctgtggctccagattttggagcaaatctgttgaagagc
cacattcttgtaaaggaagggggtgacgtgctgattgactgcaagccgaagatgtctccc
agaggcttgatcacctggaaaaaaggcaatgaggccctaagagagaatagcagaatgact
gttctggagagcggaagtctgcgaatatccaatgccatgaaatcagatgccggcctctac
acatgtgtagcacgcaaccagtttggcgtagcaagcagctcagggacaatgatggtgaaa
gaggctacagtaatcacaacacccccctcaacattggatgttacagtgggtgagagcatt
gttttgccctgtcaagtgacccatgacccctcactggagctcaagtttacgtggttcttc
aatgagcagctcatccattttggcagtcatggaggatactttgagaaagttggaagtcat
tcttctggagacattatgattcggaatattcagatgaaacatgcagggaagtacacatgt
gccgtgcagaccaaggtggacagcagctctgttgccacggacctgatcgtcagaggtccc
cctggcccccctaccagcatccatgtggaagagctcactgatactacagccactctctct
tggaagcctggtcctgataatcacagtccaattaacgcctacacaatacaggctagaacc
cccttctcactgggatggcaagctgtcgccacagtgccagaagaagtaggaggtcgccgg
ctaacagctacagtaatcgagctcagcccttgggtggagtatgagtttcgagtggtggga
atcaatgcactgggtacaggtgagcccagcaaaccctccaagcaagtaaggaccaaagat
acactccccaaggttgctccagctaatgtgagtggaggtggtggaagcagatcagaatta
gttatcacttgggagcctgttcctgaggaacttcagaatggcccaggttttggctatgtg
gtggcttttcgaccttatggtgccacaggttggatgcaggctgctgtaccttctgcagag
gcctccaaatacatcttcaaaaatgaaagcattcaaccattctccaagttccaggtcaaa
gtgggcgtttacaacaacaagggtgaagggccgtttgggccagttgtcactatctactca
ggtgaagaagaacctgccagagcacctacaagggtaagggttcagagtctttcagcatca
gagttggaggtgacatggaaaacccttccatggagtacaaacagaaggcgtgttcttggc
tatgagttgaggtactgggagaagaaggagaaagaagatatggctagtgtgttaaggaca
gtgggaaatcggacatctgctattattcagggtttaaaaggaagcaggacatattatatc
acagtgagagcctacaattcagctggagctggacctccaagtgcagcagtcaatgtgacc
accaagaaacctcctcccagtcagcctcctgtaaaggtaatgtggaacacatcaaactcc
aagatcatactgaattgggagcaagtgaaagctttggagaatgaatctgaggtcatggga
tataaggttttgtataagcaaaaccgtcacagtcgtcctagagtgatggagaccaacacc
acatcagtggagctgtctttgcctccagatgaagaatacatcattcagatcaagcctttt
ggagaaggaggagagggcagcagcagcaaacaaatcacaatccccagaatatctggtccc
aatgcaattggatctgcatccagcgtatccactctctcagccctcagcacaatagccctg
tccctcacagcccggacatccttatga
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