Tachysurus fulvidraco (yellow catfish): 113643151
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Entry
113643151 CDS
T08119
Symbol
atg4b
Name
(RefSeq) cysteine protease ATG4B isoform X1
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd04136
Autophagy - other
tfd04140
Autophagy - animal
tfd04145
Phagocytosis
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
113643151 (atg4b)
04140 Autophagy - animal
113643151 (atg4b)
04136 Autophagy - other
113643151 (atg4b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tfd01002
]
113643151 (atg4b)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tfd04131
]
113643151 (atg4b)
03029 Mitochondrial biogenesis [BR:
tfd03029
]
113643151 (atg4b)
Peptidases and inhibitors [BR:
tfd01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
113643151 (atg4b)
Membrane trafficking [BR:
tfd04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
113643151 (atg4b)
Mitochondrial biogenesis [BR:
tfd03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
113643151 (atg4b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_C54
ATG4_LIR
Motif
Other DBs
NCBI-GeneID:
113643151
NCBI-ProteinID:
XP_027003037
UniProt:
A0A7I6IQ11
LinkDB
All DBs
Position
5:complement(13039791..13045677)
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AA seq
391 aa
AA seq
DB search
MDAATLTYDTLRFGEFEDFPETPEPVWVLGKQSNALLEKDEILSDITSRLWFTYRKNFQA
IGGTGPTSDTGWGCMLRCGQMILAEALLRRHLGREWRWVRGQQPREEYLNILNAFIDKKD
SYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVLKKLAVFDTWSRLAVHVAMDNTVIIEEIK
KLCMPWLDFERGGCTDPLEMNGCMEGACAMALEDSAVWKPLVLLIPLRLGLTDINEAYIE
TLKQCFMMPQSLGVIGGKPNSAHYFIGFVGEELIYLDPHTTQPAVEPCEYGEIQDDSYHC
QHPPCRMHICELDPSIAVGFFCQTEDDFDDWCAHIRKLSSCRGLPMFELVDSQPSHLINT
EAINLTPDFSDSDRLERFFDSEDEEFEILSL
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atggatgcggctactcttacctatgatacactacgatttggggagtttgaagatttccca
gagacacctgagcctgtctgggtcctggggaagcagtccaatgctctgctagagaaggat
gagattctgtcagacattacttcacgcttgtggttcacctacagaaagaacttccaggcg
attggaggaacaggacctacgtctgacacaggatggggttgcatgctgcgatgtggacag
atgattcttgctgaagcattgcttcgcagacacttgggtcgtgagtggagatgggtgaga
ggtcagcaaccaagagaagagtatttgaacatcctcaatgccttcatagacaagaaggac
agctactactctattcaccaaatagctcagatgggagtaggagagggcaagtccataggc
cagtggtatggcccaaatacagtggcacaggtactcaagaaactggcagtgtttgacaca
tggagcagattggcagttcatgtggccatggacaacactgtgataatcgaggaaatcaag
aagttgtgtatgccatggttggactttgagaggggagggtgcacagaccctttggagatg
aacgggtgtatggagggtgcatgtgccatggctttggaggactcagctgtgtggaaacca
cttgtgttgctcatccccctgcgcctgggcctcactgacatcaacgaggcctacattgaa
actctaaagcaatgcttcatgatgccccagtctttaggagttattggtggaaagccgaac
agcgcgcattactttatcggctttgttggtgaggagctcatatacctggaccctcataca
actcagccagctgtagagccttgtgaatacggagaaattcaagacgactcctatcactgc
cagcacccgccttgtcgcatgcacatctgtgagctcgacccatccatagctgttggattc
ttctgtcaaacagaggatgactttgatgattggtgtgcacatatccgaaaattatcaagc
tgtagaggtcttcccatgtttgaacttgtagacagtcagccatcacatttgatcaacacc
gaagccattaatctcactcccgatttctcagactcggaccggcttgagcgtttctttgac
tctgaagacgaggagtttgagatcctgtctttgtga
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