Tachysurus fulvidraco (yellow catfish): 113643186
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Entry
113643186 CDS
T08119
Symbol
atg4c
Name
(RefSeq) cysteine protease ATG4C isoform X1
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd04136
Autophagy - other
tfd04140
Autophagy - animal
tfd04145
Phagocytosis
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
113643186 (atg4c)
04140 Autophagy - animal
113643186 (atg4c)
04136 Autophagy - other
113643186 (atg4c)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tfd01002
]
113643186 (atg4c)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tfd04131
]
113643186 (atg4c)
03029 Mitochondrial biogenesis [BR:
tfd03029
]
113643186 (atg4c)
Peptidases and inhibitors [BR:
tfd01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
113643186 (atg4c)
Membrane trafficking [BR:
tfd04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
113643186 (atg4c)
Mitochondrial biogenesis [BR:
tfd03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
113643186 (atg4c)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_C54
Motif
Other DBs
NCBI-GeneID:
113643186
NCBI-ProteinID:
XP_027003088
UniProt:
A0A7I6IPS7
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All DBs
Position
5:10183042..10196765
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AA seq
460 aa
AA seq
DB search
METKGNDEVEKIKSKFMSAWNNVKYSWVLKTKTSFSRNSVVFLLGKCYHFKADDEDSPTE
SCSTEIFDDATVMGNVEEFRRDFASRIWLTYRDDFAVLPGSTISTDCGWGCTLRAGQMML
AQALLLHLLGRDWTWPDSLTLEPLDTETWTSSAARKLVASLEASFQGDRQRHPETVYQPQ
CGAEEADSHLKEVYHRTIVSWFGDTFSAQLGVHRLVHLGMTSGKRAGDWYGPGVVAHILR
KAVEESTDPELRGVTVYVAQDCTVYSADVIESHSVQVVPHAAPEEALADSRAVIILIPVR
LGGEKINPEYFSFVKAILSLEYCIGIIGGKPKQAYYFVGFQDDSMIYMDPHYCQSFVDVS
TSNFPLQSYHCPSPKKMPFVKMDPSCTIGFYSKSVQDYERISSELSKVLQPSSKEKYPAF
TFMKGHGRDYELSVPVEKREWPFIKDTRSPGATAGDFVLL
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atggagactaaagggaacgacgaggtggagaaaataaagtcaaaatttatgtcggcatgg
aacaatgtgaaatacagttgggtgctgaaaacaaagacttcctttagtcgcaattctgta
gtcttccttctgggaaaatgttatcacttcaaggcagatgatgaagacagtcccacagaa
agctgcagtacagagatatttgatgatgccactgtcatgggcaatgtggaagaatttcgg
agggatttcgcttcccggatctggctcacctatcgggacgacttcgctgtgctgccggga
tcgaccattagcacagactgtggttggggctgcactctccgagccgggcagatgatgctg
gcccaggcacttttactacatctcctgggtcgagattggacctggcctgactcactgacc
ttagagcctctggacactgagacatggacgagcagcgcagcacgaaaactggtcgcttca
ttagaagcttcattccagggagacagacagagacacccagagactgtataccagccccag
tgtggggcagaagaagctgactcccacctgaaagaggtgtaccaccgcactattgtgtcc
tggtttggagacactttctctgcccagcttggggtccacaggctggtccatctgggtatg
acctcagggaaaagagcaggagattggtatggtcctggagtagtggcacatatactcagg
aaagctgtggaagagtctacagatccagaactgcgaggtgtgactgtttatgtggcacag
gactgcacagtgtacagcgctgatgttattgagagtcactcagtgcaggtggtcccacac
gcagcccccgaggaagcactcgctgacagcagagccgtcatcattctcatccctgtcaga
ctggggggagagaagatcaaccctgaatacttcagctttgtcaaggctatcctgagtttg
gaatattgcatcggtatcattggagggaaacccaaacaagcctactacttcgtaggattt
caagacgacagcatgatttacatggaccctcattactgtcagtcttttgtggatgtcagc
acaagcaattttcctctgcagtcatatcactgtccatcaccaaagaagatgccttttgtt
aaaatggacccaagctgcactattgggttctactccaaaagtgttcaagattatgaaaga
attagcagtgagctgtcaaaggtgctgcagccgtcatcgaaagagaagtacccggcattt
acctttatgaaaggacacgggagagattatgaactgtctgttcctgtggagaagagagag
tggcccttcatcaaagacacacgaagtcccggggccaccgcaggggactttgtgctgctg
taa
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