Tachysurus fulvidraco (yellow catfish): 113643215
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Entry
113643215 CDS
T08119
Symbol
tubb1
Name
(RefSeq) tubulin beta-1 chain
KO
K07375
tubulin beta
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd04145
Phagosome
tfd04517
IgSF CAM signaling
tfd04540
Gap junction
tfd04814
Motor proteins
tfd05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
113643215 (tubb1)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
113643215 (tubb1)
09144 Cellular community - eukaryotes
04540 Gap junction
113643215 (tubb1)
09142 Cell motility
04814 Motor proteins
113643215 (tubb1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
113643215 (tubb1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tfd03036
]
113643215 (tubb1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tfd04812
]
113643215 (tubb1)
04147 Exosome [BR:
tfd04147
]
113643215 (tubb1)
Chromosome and associated proteins [BR:
tfd03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
113643215 (tubb1)
Cytoskeleton proteins [BR:
tfd04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
113643215 (tubb1)
Exosome [BR:
tfd04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
113643215 (tubb1)
Exosomal proteins of colorectal cancer cells
113643215 (tubb1)
Exosomal proteins of bladder cancer cells
113643215 (tubb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Misat_Tub_SegII
Tubulin_3
Tubulin_2
Motif
Other DBs
NCBI-GeneID:
113643215
NCBI-ProteinID:
XP_027003124
LinkDB
All DBs
Position
5:complement(25414630..25419345)
Genome browser
AA seq
465 aa
AA seq
DB search
MREIVHLQIGQCGNQISSKFWEVISEEHGINAVGTYEGDTALQLERVSVYFNEANGGKYV
PRALLVDLEPGTIDSVRSSHIGELFRPDNFIHGTSGAGNNWAKGHYTEGAELVEQVLDRV
RTEAESCDCLQGFQFVHSLGGGTGSGMGTLLINKIREEFPDRIMNSFSVMPSPKVSDTVV
EPYNATLSIHQLIESTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSMTMSGVTTSL
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTPRGCQQYQGLSVPELTQQMFDARNMM
TACDPRHGRYLTVAAVFRGHMSTKEVDEQMLSVQKKNSNNFVDWIPHNVKVAVCDIPPRG
LKMAATFIGNNTAIQEIFRRVGEQFAMMFRRKAFLHWYTGEGMDEMEFTEAESNLNDLVS
EYQQYQDATAELDWEPEEEITEVEGNAATVINSRVDIKTETMSED
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgaaattgttcatcttcagatcggacagtgtggaaatcaaatcagttcaaagttc
tgggaagttatcagtgaggaacatggtatcaatgcagtgggaacctatgagggggacaca
gcgcttcagctggagagagtcagtgtctactttaatgaagcaaacggtgggaagtatgtt
ccccgggcattgctggtggatttggaaccaggaacaatagacagtgtgaggagcagtcac
attggagaactcttcagaccggacaacttcattcatgggacttctggagctggaaataac
tgggcaaaaggtcactacacagaaggtgctgagttagttgagcaagtattagaccgtgtc
cgtactgaagctgaaagctgtgactgcctgcaaggcttccagtttgttcactccttgggt
ggtggtactggttcaggaatggggaccctactcatcaacaaaatccgtgaagagtttcca
gacagaatcatgaatagctttagtgtcatgccctctcctaaagtctctgacacagtagtg
gagccttataatgccacactgtccattcaccaactcattgagagtacagatgagacattc
tgcattgacaatgaagctctttatgatatctgtttccgaacactgaagctcaccactcca
acatatggagatctcaatcatcttgtgtctatgactatgagtggagtcacaacttctctg
cgcttccctggtcagctgaacgctgacctccgcaagctggctgtcaacatggttcctttt
ccccgccttcacttctttatgcctggctttgcacctctcacacctcgagggtgtcaacaa
taccagggcctttctgttcccgagctcacccagcagatgtttgatgcccggaacatgatg
acggcatgtgatccccggcatggccgctacctcactgtcgcagcagtttttcgtggccac
atgtccactaaagaggtggatgagcaaatgctttctgttcaaaagaagaacagcaataac
tttgtggattggatcccccacaatgttaaagtggccgtttgtgacatcccaccacgtggc
cttaaaatggcagctaccttcattggaaacaatacagcaatccaagaaatattccgtcga
gtcggggagcaatttgccatgatgttccgcaggaaggcttttctgcactggtacacagga
gaaggaatggatgagatggagttcacagaggctgagagcaacctgaatgatctggtatcc
gaataccagcaatatcaggatgccacagctgagctggattgggagccagaggaagaaata
acagaggtagagggaaatgcagcaacagtaataaacagcagagtagatataaaaactgag
actatgagtgaagattag
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