Tachysurus fulvidraco (yellow catfish): 113643230
Help
Entry
113643230 CDS
T08119
Symbol
nhej1
Name
(RefSeq) non-homologous end-joining factor 1 isoform X1
KO
K10980
non-homologous end-joining factor 1
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
113643230 (nhej1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tfd03400
]
113643230 (nhej1)
DNA repair and recombination proteins [BR:
tfd03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
113643230 (nhej1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XLF
XLF_CC
XRCC4
Motif
Other DBs
NCBI-GeneID:
113643230
NCBI-ProteinID:
XP_027003156
LinkDB
All DBs
Position
5:complement(25325230..25333822)
Genome browser
AA seq
355 aa
AA seq
DB search
MEKKWQNIWDTGRTMRHLCNIQRNVQYTNQWGCMENTGHAEGALSALPWVHVNVGGSKLL
AKAWFGDAEYRLLLSDLSSVWEEEMSRNDIKSRAQVLNKRLRAPVHAFFAHLRSVAWPCF
SRQSSEQNTSVQFHLVHHEGHLTVKLKSDMGDVPFYWEFHCSPASVSLVSRELVSPLLSM
TQVLHRHVGELTALLLKKDAEIQDYKENGAVLSRGRLQTEPFDEEMYRKNFNQRLPKMLQ
DSLEFDSELQELYVSICDARNTRKRKQSPEYSSASVDTFIPDQDQTSCVPTDMRPASFRF
DANRIMQQAEDTQSANTKETVRCPLPIAAASAVPVVTSAGRSDMPKKMKATGLFQ
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagaagtggcaaaacatatgggatactggaagaacaatgagacatctatgcaat
atacaaagaaatgtgcaatatacaaaccaatggggatgtatggagaatacaggccatgct
gagggagcgttgtctgctttgccatgggtgcatgtgaatgtcgggggttccaagttgttg
gccaaagcctggtttggtgacgcagaatatcgattgctgctgagtgacctgagcagcgtt
tgggaggaagagatgagcagaaacgacatcaaaagtcgtgctcaggttctaaataaacgt
ctaagggctccagtacatgcattttttgctcacctgcgctcagtggcttggccttgtttc
tccagacaatcttctgaacagaacacatctgtacagttccatctcgtgcatcacgagggc
catctaacagtgaaactcaagagtgatatgggagatgtaccattctattgggagttccac
tgcagccctgcctcagtatcattggtttccagagagctagtgagtcccttgttgtctatg
actcaagtgctgcataggcatgttggagaactaactgctttgttgctcaagaaagacgct
gagatacaagactacaaagagaatggagcagtgcttagtagaggtaggcttcagactgag
ccatttgatgaagagatgtacagaaagaacttcaaccagagacttccaaagatgttgcag
gacagtctggaatttgattctgagctgcaagagctgtatgtgtctatatgtgatgcgaga
aatacccggaaacgcaagcaatctcccgaatacagctctgcttcagtagacacctttatc
cctgaccaggaccagaccagctgtgtgccaacagatatgaggcctgcctcttttcggttt
gatgctaatcgtataatgcagcaagcagaagacacacagtctgctaacaccaaagagact
gtcagatgcccattacccattgctgctgcttctgctgttcctgtagtcacatctgctggc
agatcagatatgccaaagaagatgaaagcaactgggctcttccagtga
DBGET
integrated database retrieval system
