KEGG   Tachysurus fulvidraco (yellow catfish): 113643253
Entry
113643253         CDS       T08119                                 
Symbol
rae1
Name
(RefSeq) mRNA export factor isoform X1
  KO
K14298  mRNA export factor
Organism
tfd  Tachysurus fulvidraco (yellow catfish)
Pathway
tfd03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:tfd00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    113643253 (rae1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tfd03019]
    113643253 (rae1)
   03036 Chromosome and associated proteins [BR:tfd03036]
    113643253 (rae1)
Messenger RNA biogenesis [BR:tfd03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     113643253 (rae1)
Chromosome and associated proteins [BR:tfd03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    113643253 (rae1)
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 WD40 Beta-prop_EML_2 Beta-prop_WDR3_1st WDR55 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR3_2nd WD40_Gbeta EIF3I Beta-prop_EML Beta-prop_TEP1_2nd Beta-prop_RIG_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_Aladin Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd WD40_RFWD3 ANAPC4_WD40 eIF2A Beta-prop_IFT140_1st Beta-prop_EIPR1 NBCH_WD40 Beta-prop_ACSF4 Beta-prop_SPT8 ExoI_SH3 Beta-prop_WDR41
Other DBs
NCBI-GeneID: 113643253
NCBI-ProteinID: XP_027003211
LinkDB
Position
5:complement(16530721..16536743)
AA seq 369 aa
MSLFGSSSGFGAGGTGVFGTTTTDSHNPMKDVEVTSPPDDSISCLAFSPPTLPGNFLIGG
SWANDVRCWEVQDNGQTVPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLNSNQA
MQIAQHEGPIRTIHWIKAPNYNCVMTGSWDKTLKFWDTRSPNPMMSLQMPERCYCSDVVY
PMAVVATAERGLIVYQLENQPSEFRRIDSPLKHQHRCVAIFKDKQNKPTGFALGSIEGRV
AIHYINPPNPAKDNFTFKCHRSNGTNTTTPQDIYAVNAIAFHPVHGTLATVGSDGRFSFW
DKDARTKLKTSEQLDQPITACCFNNNGNIFAYSSSYDWSKGHEYYNPQKKNYIFLRNAAE
ELKPRNKKW
NT seq 1110 nt   +upstreamnt  +downstreamnt
atgagcttgttcggttcaagttctggatttggggccggaggcacaggtgttttcggcacc
accacaacagacagtcataatccaatgaaggatgttgaagtgacatcaccaccagatgac
agcatcagctgcttggcctttagtcctccaacattgcctggaaactttttgattggtggc
tcttgggccaatgatgtgagatgctgggaagttcaagataatggccagacagtccctaaa
gctcagcagatgcacacaggccctgtgctggatgtttgctggagtgatgatggaagtaaa
gtctttacagcctcctgtgacaaaactgccaaaatgtgggatctgaacagtaaccaggcc
atgcagatagcacaacatgaaggtccaatcaggacaatccactggataaaagcaccaaac
tacaactgtgtgatgactggcagttgggacaaaacgctgaaattttgggacacccgctct
ccaaaccccatgatgtctctgcagatgcctgagagatgttactgctctgatgtggtgtat
ccgatggctgtggtggccactgcagaacgagggttaattgtgtaccagttggagaaccag
ccatctgaattccggcgtatagattcacctctgaaacatcagcaccgctgtgtggccatc
tttaaggacaaacaaaataaacccactggatttgcactgggcagtattgagggacgagtg
gccattcactacattaacccacccaaccccgccaaggataatttcaccttcaagtgccat
agatctaatggaacaaacaccaccacaccccaggatatttacgctgtcaatgccattgct
ttccatcctgtgcacggcacgttggccacagtgggctcagacggccgattcagtttctgg
gataaggacgctcgcacaaagctgaaaacctctgagcagcttgatcagccaatcacagct
tgctgcttcaacaacaatggcaacatatttgcctacagctccagctatgactggtccaag
ggacatgagtactacaacccccagaagaagaactacatttttctgcgaaatgctgctgag
gaactcaagcctcggaacaagaaatggtga

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