Tachysurus fulvidraco (yellow catfish): 113643358
Help
Entry
113643358 CDS
T08119
Symbol
taf1a
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit A
KO
K15212
TATA box-binding protein-associated factor RNA polymerase I subunit A
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tfd03021
]
113643358 (taf1a)
Transcription machinery [BR:
tfd03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
113643358 (taf1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF1_subA
P16-Arc
Motif
Other DBs
NCBI-GeneID:
113643358
NCBI-ProteinID:
XP_027003354
LinkDB
All DBs
Position
9:complement(20534500..20540610)
Genome browser
AA seq
446 aa
AA seq
DB search
MDNLQLQNPEANNDDISEDEESQTTMKRTSLLHVSPSKKHCKETGFHKSTRLCLDAIRDA
VLHHRWQEAAQYMQVYAETLEDTTAGKQSIACEIIWKLGAEVLKHHPHKDVEQFNSFYDR
MKNTGVKNYAKVCLEQAFHLLLHGHIQKAKQQLSVAMSWRYGKQSAKQSLELKLIHAYCG
FMDYLIWSSKRSSVSDAENCENNHELHSYFRQASVTLQELIKHPGVWDPFVWGCIDMFEF
YNAEEEVLQMLQNYANNKDFPSNPNAHVYLYKHQKRHKASIDELLSTLKGLHSLVPSHEL
MLDYCTLLIQSEEQKDLQNALRVALNLLEYSSWKTDMDAWTCLLKVLECIKHKDYNTLIT
EEMEGKRELWMKMHFKAFHNRKDSKENEALVEVKVEAGRLLGIYSRHYKYAYMLKRRTLF
RRQDEGKKEKSRKKHDLKLKSPVYSI
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggataatcttcagctgcagaatccagaagcaaataacgatgacatttcggaggatgaa
gaaagtcagacgacaatgaaaaggacgagtttgttgcacgtctctccctctaaaaagcat
tgtaaagaaactggttttcataaaagcacaagattgtgtcttgatgccattagagatgcc
gttcttcatcatcgctggcaggaagctgcacaatatatgcaagtttacgctgaaacactg
gaagacaccacggctggcaagcagtcgatcgcctgtgagattatttggaaacttggcgct
gaagtcctcaagcatcatccacacaaagacgtagaacagtttaattctttctacgaccgc
atgaaaaacacaggagtgaaaaattatgcaaaggtctgtctggagcaggctttccacctc
ctgttgcatggccatattcaaaaagccaagcagcagctttcggtcgccatgagctggagg
tacggcaagcagtctgccaaacagtctctggagttaaaactcatccacgcctactgcggc
tttatggattatttaatctggtcttcgaaaaggtcgtctgtttctgatgcagagaattgt
gaaaataatcatgagttgcacagctacttcagacaagcctctgtgaccctgcaggaactc
atcaaacatccaggagtgtgggaccctttcgtatggggttgtattgatatgtttgaattc
tacaacgctgaagaagaagttctgcagatgctgcaaaactatgccaataacaaggatttt
ccatcaaatcccaacgcacacgtttacttatacaagcatcagaaaagacataaagcttca
atagacgaacttcttagcaccctgaagggtctgcactcgctggttcccagtcatgaactg
atgctggattattgcactctgttgattcagtcagaagaacagaaagatctacagaacgct
cttagagttgctctgaatcttctagaatactccagctggaagactgacatggacgcgtgg
acgtgtctgctgaaggttctcgaatgcatcaaacataaggattacaatacccttataaca
gaagagatggaaggaaaaagagagctctggatgaaaatgcattttaaagccttccacaac
aggaaggattctaaagagaacgaagcacttgtggaagtcaaagtcgaagcaggaagactc
ttgggcatatacagcagacattacaagtacgcgtacatgctaaagaggagaaccttgttc
agaagacaagacgagggaaaaaaggaaaaatcaagaaaaaaacatgatttgaaactaaag
agtccagtttactccatctga
DBGET
integrated database retrieval system
