Tachysurus fulvidraco (yellow catfish): 113643491
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Entry
113643491 CDS
T08119
Symbol
vps53
Name
(RefSeq) vacuolar protein sorting-associated protein 53 homolog
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tfd04131
]
113643491 (vps53)
Membrane trafficking [BR:
tfd04131
]
Protein recycling
Others
EARP complex
113643491 (vps53)
Endosome - Golgi transport
Tethering complex
GARP complex
113643491 (vps53)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
Vps54_N
COG4_N
NBD94
GrpE
Syndetin_C
Sec8_N
FBF1
Laminin_II
COG5_N
VPS51_Exo84_N
COG3_N
ING
Motif
Other DBs
NCBI-GeneID:
113643491
NCBI-ProteinID:
XP_027003576
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All DBs
Position
11:10677136..10697107
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AA seq
831 aa
AA seq
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MMEDEELEFVEDLDAILHLTPEVQLAIEQVFPSQDPLDRADFNAVEYINTLFPTEQSLAN
IDEVVNKIRLKIRRLDDNIRTVVRGQTNVGQDGRQALEEAQIAIQQLFGKIKDIKDKAEK
SEQMVKEITRDIKQLDHAKRNLTTSITTLNHLHMLAGGVDSLEAMTRKRQYGEVANLLQG
VVNVLEHFQKYMGIPQIRQLSERVKAAQSELGTQILADFDEAFPAQGSKRPGGPSIVLRD
ACLVANVLDPRIKQEIIKKFIRQHLSEYLVLFQENQDVAWLDKIDRRYAWIKRQLVDYEE
KYVRMFPEEWCMTERIAVEFCHITRTELAKLMRARAREIEVKLLLFAIQRTTNFEGLLAK
RFSGSTLSNSPGKRPETPLEPTNPFLEDESGEDNISEKDEDLVRPKKPKTPENPFHGIVS
KCFEPHLYVYIESQDKNLGELIDRFVADFRAQGPPKSGTEEGGAVLPSCADLFVYYKKCM
VQCSQLSTGEPMIALTTIFQKYLREYAWKILSGNLPKTSSNSGGLTISSLLKEKEGSEVA
KFTTDELCLICSILSTAEYCLATTQQLEEKLKEKVDKPLMERINLTGEMDTFSTVISNSI
QLLVQDLDAACDPALSAMSKMPWQSVEHVGDQSPYVTSVIMHIKQNVPIIRDNLAATRKY
FTQFCIKFINSFIPKFINHLFRCKPISMVGAEQLLLDTHSLKTVLLDLPSIGSQVLRKAP
ASYTKIVVKGMTRAEMILKVVMAPHEPSVVFVDNYIKLLADGNPETFQKILDMKGLKRSE
QSSMLELFRQRLPTPPSGPDTGPSMSFSTPTPEQESSRIRKLEKLIKKRIQ
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atgatggaagatgaagaattagaatttgtggaggatttggacgcgattttacaccttacc
cccgaagtgcagctggccatcgagcaggtgtttcccagtcaggacccactggatcgagct
gatttcaatgcagttgaatacatcaacactttgtttccaactgagcagtcattggcaaac
atagatgaagtggtaaacaagattcgactaaaaatcagacgtctggatgacaacatcagg
acagtggtgaggggacaaactaacgtgggacaggatggaaggcaggccctggaggaggct
cagatagccatccagcaactgtttggcaaaatcaaagacatcaaggacaaagcggaaaaa
tctgagcaaatggtaaaagagatcacccgggacatcaagcagctggaccatgcaaagcgt
aacctaaccacgtccattactacccttaatcacctgcacatgctagcaggaggggtggac
tcactggaagccatgacacgcaagaggcagtatggggaggtcgccaacttgctccaggga
gtagtcaacgtgctggaacacttccaaaagtatatgggcatccctcagatccgccaactg
tctgaaagagtgaaagcagcacaaagtgaactaggcacacagatcttagctgactttgat
gaggcttttcctgctcagggctcaaagaggcctggaggccccagcattgtgcttagagat
gcctgtttggtggccaatgtcctggatcctcgcattaagcaggaaataatcaagaagttt
attaggcagcatctctctgagtacctggtactctttcaagagaaccaggatgtggcatgg
ttggataagattgaccgccgatatgcatggataaagcgtcagctagtagactatgaggag
aagtacgtccgcatgtttcctgaagagtggtgcatgactgagcgtatcgccgtggagttc
tgccatatcaccaggactgaactggccaagctgatgcgagctcgtgccagggagattgag
gtcaaactcttgctctttgctattcagaggaccaccaattttgaggggctgctggctaag
cgcttctcaggcagcaccttgagtaacagcccggggaagagacctgagacgcccttggag
cccactaacccttttctggaggatgagtcaggagaggacaacatttctgagaaggatgaa
gatctggtcaggccgaagaagcccaagaccccagagaacccgttccatggcattgtttca
aaatgcttcgagcctcatctctacgtctacatcgaatcacaggacaagaacctcggggag
ctgattgaccgctttgtggctgatttccgagcacaaggtccccctaagtcaggcacagaa
gaagggggagctgtgttgcccagctgtgcagatctctttgtatactataaaaagtgtatg
gtccagtgctctcagctgagcacaggagaacccatgattgcccttactaccatcttccag
aagtacctgcgcgagtatgcctggaagatcctgtctgggaatctgcccaagacaagcagt
aacagtggcggtctgaccataagcagcctgttaaaggaaaaagagggttcagaggtggcc
aaatttaccacagacgagctctgtcttatatgtagtatcctcagcacagctgaatactgc
cttgctaccactcagcagttggaggagaagctaaaggaaaaagtggacaagccactcatg
gaacggattaatctaacaggagagatggacacctttagcactgtgatctccaacagcatc
cagcttttggttcaggatctggatgcggcttgtgaccccgcactctcagccatgagcaag
atgccatggcagagcgtggagcatgttggtgaccaaagcccctacgttacttcagtcatc
atgcatataaaacaaaatgtcccaatcatcagagacaacttggctgccacccgcaaatac
ttcacccagttctgcataaagttcatcaactcctttattccaaagttcatcaaccacctg
ttcaggtgtaaacccatcagcatggttggagctgagcagcttttattggacacgcactct
ctgaagacagttttgttagacctcccatccattggctcgcaggtccttcgcaaagctcca
gcaagttacactaaaatagtggtcaaagggatgactcgggcagagatgattctaaaggtg
gtcatggctcctcatgagccatcagtggtctttgtggataattatatcaagcttcttgct
gatgggaacccagagactttccagaaaattctagacatgaagggactgaagcgcagtgag
cagagcagtatgctggagcttttcagacagaggttacccactcccccctcggggccagat
acagggccctcaatgtccttcagcacgccaacgcctgagcaggagtcctcacgcatccgc
aaactggagaagctgatcaaaaaacgaattcagtga
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