Tachysurus fulvidraco (yellow catfish): 113643565
Help
Entry
113643565 CDS
T08119
Symbol
vars1
Name
(RefSeq) valine--tRNA ligase
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
113643565 (vars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
tfd01007
]
113643565 (vars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tfd03016
]
113643565 (vars1)
Enzymes [BR:
tfd01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
113643565 (vars1)
Amino acid related enzymes [BR:
tfd01007
]
Aminoacyl-tRNA synthetase
Class I (U)
113643565 (vars1)
Transfer RNA biogenesis [BR:
tfd03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
113643565 (vars1)
Prokaryotic type
113643565 (vars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
GST_C
tRNA-synt_1_2
Val_tRNA-synt_C
Arc1p_N_like
GST_C_2
GST_C_3
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
113643565
NCBI-ProteinID:
XP_047667470
LinkDB
All DBs
Position
3:complement(24450969..24476262)
Genome browser
AA seq
1267 aa
AA seq
DB search
MDSLRASLHPDDFRSLLVRIAAEYCPTPPRVCAKECPPNVVHTCPALVLGGPEGTTLCGA
SAVSWYLASAGKKVGSDAKQQSQVWQWLSFTDNELIPVSCAVTYPLLGVTGIDKKLQQSS
HGDLLRVLKFLDQNLEPRTFLVGESVTLADMAVATAVLLPFKYVLEPSHRKLLVNVSRWF
DTCVNQPQFLKVLGKISLCEKMVPVTPKPGAVPTETAEANDVTSNGPPKTEAQLKKEAKK
REKMEKFQQKKEMEEKKKQMQSQSEKKAKPEKKELDVITYNIPTQDGEKKDVLSPLPDSY
SPQYVEAAWYSWWEKQGFFKPEYGRKSISEVNPRGTFMMCIPPPNVTGSLHLGHALTNSI
QDSLTRWHRMRGETTLWNPGCDHAGIATQVVVEKKLKREKGMSRHDLGRVKFMEEVWKWK
EEKGDRIYHQLKKLGSSLDWDRACFTMDPKLSYAVQEAFIRMHEEGVIYRSKRLVNWSCT
LNSAISDIEVDKKELTSRTLLPVPGYKEKVEFGVLVSFSYKIEGSDEEVVVATTRIETML
GDTAVAVHPNDPRYQHLKDKVAVHPFCDRKLPIVFDDFVDMSFGTGAVKITPAHDHNDYE
VGERHKLPFINILDENGFLINVPPPFLGMKRFDARRAVLQALKDRGQFKEIKDNPMVVPV
CSRSKDIVEPLLKPQWYVDCSAMGKQAADVVRSGELKIIPEHHIKTWFNWMDNIRDWCIS
RQLWWGHRIPAYFVTVNDPSVKPGEDVDGHYWISGRSEEEARVKAAKRFNVTEDKISLRQ
DEDVLDTWFSSGIFPFSIFGWPNDNEDLRVFYPGTLLETGHDILFFWVARMVMMGLKLTG
KLPFKEVYLHAVVRDAHGRKMSKSLGNVIDPLDVITGISLEGLHAQLKDSNLDPLETERA
KQGQKSDYPNGIPECGTDALRFALCAYTSQGRDINLDVNRILGYRHFCNKLWNAVKFAMR
TLGENFVPWEKAQLCGSESVSDRWILSRLSAAVALCGNGFQAYDFPAITTAIYNFWLYEL
CDVYLESVKPVLSRTDAEGQKQAEVCRQTLYTCLDVALRLLSPIMPFVTEELFQRLPRRQ
PQDSPPSISVTPYPESSEFCWHSEEIDHQMEFVMNVVKTIRSLRADYNLTKTRADCYLQC
IDSATAALVEKYTLQIQTLSYSQTIHLVIGSDSAVPQGCAVAIASDKCTVHLLLKGLIDV
EKEVAKLTTKKGELQKQMEKLEEKMSKSDYREKVPAKVQEQDSEKLRQSQVELQKVTEAI
ENFRRMM
NT seq
3804 nt
NT seq
+upstream
nt +downstream
nt
atggactctctccgtgcgtccctccaccccgatgacttcaggagtttgctggtccgcatc
gctgccgaatactgtcccactcccccacgtgtttgtgctaaggagtgtccccctaatgtt
gtccacacttgccctgcactggtgctgggaggaccggagggaacgacgctgtgtggtgcc
agtgcagtcagttggtacctggcatctgcaggcaagaaggttggcagtgatgccaagcag
cagagccaggtgtggcagtggctgagcttcactgacaatgagctgattcctgtctcctgt
gccgtgacctaccctctgttaggggtgacgggcattgacaagaagcttcagcagagttcc
catggagatcttctgcgtgttctgaagtttttagatcagaatttagaacctcgcactttc
ctggttggagaaagtgtgactttggctgacatggctgttgcgacggctgtgttgcttcct
ttcaaatatgtgttggaaccttcacacaggaagttgttggtgaatgtgagcagatggttt
gatacttgtgtcaatcagcctcagttcctgaaggtgttagggaaaatctccctctgtgag
aaaatggtgcctgtgacgcccaaacctggtgctgttcccaccgagactgccgaagcaaac
gacgttacttccaatggtccacccaagacagaagcccagctgaagaaggaggccaagaag
cgtgaaaagatggaaaagttccagcagaagaaggagatggaggagaagaagaagcagatg
cagtctcagtctgagaaaaaagccaaaccggaaaagaaggaattagatgtcatcacgtac
aacatccccacccaagatggagagaaaaaagacgtcctgagccctctgccagactcgtac
agtcctcagtatgtggaagcagcctggtactcctggtgggagaaacagggtttcttcaag
cctgaatacggacggaagagcatcagtgaggtgaatccacgcggtacttttatgatgtgc
atccctcctcctaatgtgaccggctctcttcatttgggccacgccttaaccaactccatt
caggactccctgaccagatggcacaggatgagaggagagacgacgttgtggaacccgggc
tgcgatcacgccggcattgcgactcaggtggtggtggagaagaaactgaagagggagaaa
gggatgagcagacacgacctcggacgtgtaaagttcatggaagaggtctggaagtggaaa
gaggaaaaaggagatcggatctaccaccagctgaagaaactgggctcttctctagactgg
gacagagcgtgtttcactatggatcctaaactgtcctacgctgtccaggaggcttttatt
cgtatgcatgaggagggagtgatctacaggagcaagagactggtcaactggtcctgcacc
ctcaactctgccatctctgatatagaggtggataagaaggagctgacgagcagaactctg
cttcctgtaccaggctataaggagaaggtggagtttggtgtgctggtgtctttttcttat
aagatcgaggggtcagatgaggaggtggtcgtagcgaccacgcgtatcgagaccatgttg
ggcgacacagctgtggctgtgcatcctaacgatcccagatatcagcacctgaaggacaaa
gtggcagttcatccgttctgtgaccgcaagctgcccatcgtgtttgatgattttgtggac
atgagctttggaacaggtgcggtgaagatcacacctgctcacgatcacaacgactacgaa
gtgggtgaaagacacaagctgccttttatcaacatcctggatgagaatgggttcctcatc
aatgttcctcctccgttcctgggcatgaagcgtttcgacgcgaggagagctgtgctgcag
gccctgaaggacagaggccagtttaaggagatcaaagacaatcccatggtggtcccggtg
tgcagccgctctaaggacatcgtggagcctctgctgaagccgcagtggtatgtggactgc
tcagcaatggggaagcaggcggccgacgtagtcaggagcggagagctgaagatcatccca
gagcatcacattaaaacctggtttaactggatggataatatcagggattggtgtatctct
cgccaactctggtggggtcacaggatcccggcatatttcgtcacagtgaacgatccttca
gtgaaaccaggagaggacgtagacggtcattactggatcagtggccgctcagaggaagaa
gcgcgtgtcaaagcagcaaagcgcttcaatgtcactgaagacaaaatctcccttcgccaa
gatgaggatgttttggatacctggttctcctctggaatctttcccttctccatctttgga
tggccaaatgataacgaggacctgcgtgtattctatccaggcactctgctggagacaggt
catgacatcctgttcttctgggtggctcggatggtcatgatggggctcaaactcacaggc
aaacttccttttaaagaggtttatctgcacgctgtggtcagggacgcacacggcaggaag
atgagcaagtctctgggtaacgtcatcgatcctctggacgtcatcaccggaatctcgttg
gagggtctccatgctcagctgaaggacagcaatctggacccactggagactgagagagct
aaacaaggacagaaatctgattaccccaacggaatccccgagtgtggaaccgatgccctt
aggtttgccctgtgtgcctacaccagccaggggagggacattaacctggacgtgaacagg
atcctgggctacaggcatttctgcaacaagctgtggaacgctgtgaagtttgccatgagg
acgctgggtgagaactttgtgccgtgggagaaagctcagctgtgcggcagcgagagcgtg
tccgataggtggattctgtcgcgcctcagtgccgccgtggctctctgtggaaacggattc
caggcctacgatttcccagcaatcaccacagccatctacaacttctggctctacgaactg
tgtgacgtttatctggaaagcgtgaagcccgtgttgagcagaacagacgcagaaggccag
aagcaagcagaggtttgcaggcagactctctacacctgtctggatgtggcgctccgcctc
ctgtctcccatcatgccctttgtcaccgaggagctcttccagcggttgccacggaggcaa
ccccaagacagcccacccagtatctctgttaccccctacccagagagctcagagttctgc
tggcacagcgaggagatcgaccaccagatggagtttgtgatgaacgtggtcaagaccatt
cgatcactcagggccgactacaacctgaccaagacccgcgccgactgttatctgcagtgt
atagattctgctacagcagccctggtggagaaatacactctgcagatccagactctctcc
tattctcagaccatccacctggtcatcgggagcgacagcgctgtcccacagggctgtgca
gtggccatcgcttcagacaaatgcaccgtccatctcctgctgaagggtttgatcgatgtc
gaaaaggaggtggccaaactgacgacaaagaagggcgagctgcagaagcagatggagaaa
ttggaggagaaaatgtcgaagagcgactacagagagaaagttccagccaaggtgcaggag
caggattctgagaagttgagacagagtcaggtcgagctgcagaaagtgaccgaagccata
gagaacttcagaaggatgatgtaa
DBGET
integrated database retrieval system
