Tachysurus fulvidraco (yellow catfish): 113643596
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Entry
113643596 CDS
T08119
Symbol
ptbp2b
Name
(RefSeq) polypyrimidine tract-binding protein 2b isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tfd03041
]
113643596 (ptbp2b)
Spliceosome [BR:
tfd03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
113643596 (ptbp2b)
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Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_occluded
RRM_8
RRM_PARP14_3
GlcNAc-1_reg
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
113643596
NCBI-ProteinID:
XP_027003732
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All DBs
Position
11:complement(16720585..16737745)
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AA seq
518 aa
AA seq
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MDGIASDVAVGVKRSSDDLLSGSLYSGPNTSVKANGSDSKKLRVEDGMDNPPSRVIHIRK
LPNEVSETEVIALGLPFGKVTNILMLKGKNQAFLELGTEEAAITMVNYYTAVTPQVRNAP
VCIQYSNHKELKTDSALNQRAQAVLQAVCAVQEGGSPSSDSAGESVLIPPPSPVLRIIID
NMFYPVTLDVLQQIFSKFGTVMKIITFTKNNQFQALLQFSDPVNAQQAKLSLDGQNIYNS
CCTLRIDFSKLVNLNVKYNNDKSRDYTRPELPAADGQPFVDPTMAAALGKDSTSLLGSIS
PLSAAAAAAAAAGRVALSGHSAAGAVLLASNLNDEMVTPQSLFTLFGVYGDVQRVKILYN
KKDSALIQMTDGNQAQLAMSHLNGQKMYGKIIRVTLSKHQTVQLPREGLDDQGLTKDFIN
SPLHRFKKPGSKNFQNIFPPSATLHLSNIPEKVDEEDLRLLFSNSGGTVKAFKFFQDRKM
ALLQMSTVEEAIQALIDLHSYDMGRGHRLRVSFSKSTI
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atggacggcatcgctagtgatgttgcagttggtgtaaagagaagttcagatgatttgctt
tctggcagtctttacagtggtccaaacacttcagttaaggctaatggaagcgacagcaaa
aaactgagagtggaggacggcatggacaacccgccatccagagtcattcacattcgcaaa
cttccaaatgaggtttctgagacagaagtcattgccctgggcctgccctttgggaaagtc
accaatatactgatgctgaaaggcaaaaatcaggcatttttggagcttgggacggaggaa
gcagcgatcaccatggtgaactactacacagcagtgacccctcaagtgcgaaatgctcct
gtgtgtatccagtactctaaccacaaagagctcaaaacagacagtgcactaaatcagcgt
gcccaggccgttctacaagcagtgtgtgctgttcaggagggaggttctccaagttcagac
tctgcaggagagagcgtgttaataccaccgccaagtccagtcctgcgcatcatcatcgat
aacatgttttacccagtgacactggatgtcctgcagcagatcttctccaagtttgggaca
gtgatgaagatcatcacattcaccaaaaataatcaattccaagcgctgcttcaattcagc
gatcctgtcaatgctcaacaggccaaactgtctttggatggacagaacatctataactca
tgctgcacgctgcgcattgacttctccaagctggtcaacttgaatgtgaagtacaacaat
gataagagtcgagattacacaagacccgagctgcctgcagctgatggacagccttttgta
gatccgacgatggctgctgcgcttggcaaggactccacgtccctacttgggtcgatcagt
cctttgagtgcagccgcggcagcggcggcagcagccgggcgagtcgctctgtcaggacac
tcggcggctggtgcagttctgctggccagcaatctcaatgatgagatggttacgccccaa
agtctctttaccctcttcggtgtgtacggggatgtgcaacgagtcaagatcctctacaat
aagaaagacagcgccctcatccagatgacagatggaaatcaggcacagttagccatgagc
cacctgaatgggcagaagatgtatggaaaaatcatccgtgtgaccctttccaaacaccag
actgtgcagcttcctcgcgaaggcttggatgatcagggcctgactaaagacttcatcaat
tcgcccctgcaccgtttcaaaaagcctggctcaaagaatttccagaacatctttcctcca
tcagcaacactccatctctccaacatccctgagaaggtggatgaagaggacctgagactt
ctcttctctaactctggaggcaccgtgaaggccttcaaattctttcaagatcgcaagatg
gccctgctgcagatgtcaacggtggaggaggccatccaagcgctgatcgacctccatagc
tatgatatgggtcgtggtcatcgcctccgagtctccttttcaaaatccaccatctga
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