Tachysurus fulvidraco (yellow catfish): 113643617
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Entry
113643617 CDS
T08119
Symbol
tars2
Name
(RefSeq) threonine--tRNA ligase 1, cytoplasmic isoform X1
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
113643617 (tars2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
tfd01007
]
113643617 (tars2)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tfd03016
]
113643617 (tars2)
Enzymes [BR:
tfd01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
113643617 (tars2)
Amino acid related enzymes [BR:
tfd01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
113643617 (tars2)
Transfer RNA biogenesis [BR:
tfd03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
113643617 (tars2)
Prokaryotic type
113643617 (tars2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
TGS
tRNA_SAD
Motif
Other DBs
NCBI-GeneID:
113643617
NCBI-ProteinID:
XP_047667105
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All DBs
Position
3:29830067..29851029
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AA seq
692 aa
AA seq
DB search
MVVALYLRRALCHDTVRSSLRSHRSYSKLQPSASQSERLRLFEAFSKRPKQKGAEHGQEL
SVRLADGRTVKGVSGVTTPLQIAQDTRVKGAVVSRVSGALWELSRPLEADCELQLLSYDS
PEGRQVVWRTGACVLASVMETQFGAQVCREGVSDTGLYCDYRLDNSSVCLDEVEKMCEEK
AALKLPIATTQLSTHHLRQLFQDDEVRLRCAEETLVIGETVSVYRCGMCVGVSSGPLLPH
TGFLRSFMALQVSPVTLSSDPEVAGVQRILGVSFPGPRERERWEHEQEEAKKRDHRRIGK
DQELFFFNDVSPGSCFFLPKGAHIYNTLTDFIKSEYKRRGFSEVVTPTLYSTSLWQRSGH
WEHYSENMFTVTCEPHTFALKPMNCPAHCVMYEQRVRSWRELPLRWADFGALHRNEHSGA
LGGLTRVRRFCQDDAHIFCTPEQLEEEITACLDFVRSVYRVFGFTFHCLLSTRPVQYLGD
SALWDTAEQQLEKSLQLFGERWELNPGDGAFYGPKIDIQIRDAIGRQHQCATIQLDFQLP
IRFDLEYVGADGQTHRPVMVHRAVLGSLERMIAILAENFGGKWPFWLSPAQVMVLPVGDD
SEQYGRAVVQRLKEAGFMVDLDDDQGSTLNKKIRSAQLSQYNYIFVVGEKERQSGTVSVR
TRGGKQLGQRPLEEVMTSLTVLRESRSNLEHF
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atggtggttgcgttgtatttgcggcgagctctgtgccacgacaccgtgaggtcgtcgttg
aggagccacagaagctacagcaagcttcagccttcagccagccagtcagaacgactgcga
ctctttgaggccttctcaaaaagaccaaaacagaaaggggcggagcatggacaagagctg
agcgtccgattggccgatgggagaacggtgaaaggagtgtcaggggtcacaaccccatta
cagatcgctcaggacacacgggttaaaggagccgtggtgagcagggtgagtggtgcattg
tgggagttatctcgccccttagaggctgactgtgagctacagctactcagctacgactcc
ccagaaggaagacaggtggtgtggaggacaggggcatgtgtgttagcgagtgtgatggaa
acacagtttggtgctcaggtgtgtcgtgaaggtgtttcagacaccggactctactgtgac
tacagactggacaacagctcggtgtgtttagacgaggtggagaagatgtgtgaggagaag
gcggcattaaaacttcccattgctacgacacaactgagcacgcaccatctccggcaactc
ttccaggacgatgaggtgaggctgcggtgtgcagaggagacgctggtgattggagagaca
gtcagcgtgtacagatgtggcatgtgtgtaggtgtgagctccggtccactcctccctcac
acaggcttcctgcgctctttcatggcgttgcaagtttctcctgtgactttgtcgtccgat
cccgaggtggcgggggtgcagaggattctgggagtttcttttccggggccgagagaacgt
gagcgatgggagcacgagcaggaagaagcgaagaagagagaccatcgacgcatcggcaag
gaccaggagctgttcttctttaacgatgtcagtccaggaagctgcttcttcctgcctaaa
ggagctcatatttacaacacgctcactgattttataaagagtgagtacaagaggcggggc
ttcagtgaggtcgttaccccaaccctgtacagcacttctttatggcaacgctcgggtcac
tgggagcactacagcgaaaacatgttcacagtgacgtgtgagcctcacaccttcgccctc
aagcctatgaactgccccgcccactgtgtgatgtatgagcagagagtgaggtcatggcgt
gagttgcctctccgctgggctgactttggtgcgttgcaccgcaatgagcactctggggca
ctaggaggcctaactagggtacgacgcttctgtcaggatgacgcacacatcttctgcaca
cccgagcagttagaagaagagataacggcatgtttggactttgtaagaagtgtgtatcgt
gtctttggtttcacatttcattgcctgctctccactcgccccgtccagtatctcggagac
tctgccctctgggacactgcagaacagcagttggagaagagtctgcagttgtttggagag
cgctgggagctcaatccgggagacggcgctttttacggtccaaagatcgatatccagatc
cgagatgcgattggtcgacagcaccagtgtgctactatccagctggacttccagctgcca
atcagatttgacctggagtatgtaggagcggatggacagacacacagacctgtgatggtg
catcgtgcggttttgggctcactagagagaatgattgccattctggctgagaactttggc
ggcaagtggccgttttggctttcgccagcgcaggtcatggttttgccagtaggggatgat
agtgagcagtacggccgggcggtggtccagagattaaaggaggcagggtttatggtcgac
cttgacgatgaccagggttccaccttaaataaaaagattcgctcagcacagctttcccag
tataactatatatttgtggttggagagaaggagcgacagagtgggacagtcagcgtgagg
acgagaggagggaaacagttagggcagaggccactggaggaagtaatgacgtcactgacg
gtgctccgagagagtcgcagcaacctggagcatttctga
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