Tachysurus fulvidraco (yellow catfish): 113643651
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Entry
113643651 CDS
T08119
Symbol
rnf2
Name
(RefSeq) E3 ubiquitin-protein ligase RING2
KO
K10695
E3 ubiquitin-protein ligase RNF1/2 [EC:
2.3.2.27
]
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
113643651 (rnf2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tfd04121
]
113643651 (rnf2)
03036 Chromosome and associated proteins [BR:
tfd03036
]
113643651 (rnf2)
Enzymes [BR:
tfd01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113643651 (rnf2)
Ubiquitin system [BR:
tfd04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
113643651 (rnf2)
Chromosome and associated proteins [BR:
tfd03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
113643651 (rnf2)
Noncanonical PRC1 (PRC1.1)
113643651 (rnf2)
Noncanonical PRC1 (PRC1.3/1.5)
113643651 (rnf2)
Noncanonical PRC1 (PRC1.6)
113643651 (rnf2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAWUL
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-C3HC4_3
zf-RING_UBOX
zf-C3HC4_4
RING_XB3-XBAT31
zf-Nse
zf-RING_5
zf-RING_4
zf-rbx1
zf-RING_6
zf-UDP
TRAF3_RING
zf-C3HC4_5
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
113643651
NCBI-ProteinID:
XP_027003810
LinkDB
All DBs
Position
11:16122284..16127978
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AA seq
336 aa
AA seq
DB search
MTQTVQTNGVQPLSKTWELSLYELQRTPQEAITDGLEIAVSPRSLHSELMCPICLDMLKN
TMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSRDEY
EAHQERVLARISKHNNQQALSHSIEEGLKIQALNRLQRGKKHQIENGSGAEDNGDSSHCS
NASVHSNQEAGPSIKRTKTSDDSGLDMDNTTENGGGDTALDGASEIELVFRPHPTLMEKE
DAAQTRYIKTSGNATVDHLSKYLAVRLALEELRKNGEASPINVEAASEKQYTIYIPTPNN
QFTVLNGSFSLELVSEKYWKVNKPMELYFAPTKEHK
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgactcagacagtgcagactaacggggttcaacccctgagcaagacctgggagctcagc
ctctatgagttacagagaactccacaggaggccattacagatggtctggagattgctgtg
tcccctcggagtctacacagtgagctgatgtgccccatctgtctggacatgctgaagaac
accatgaccaccaaggagtgcctgcaccgcttctgcgcagactgcatcatcacagcgctc
agatccgggaataaagagtgtccgacatgcaggaagaagctggtgtcaaagcgctcgctt
cgtcctgatccaaactttgatgccctgatcagcaaaatctacccgagcagagacgagtac
gaggcgcaccaggaacgagtgctggctcgcattagcaaacacaacaaccagcaggctctg
agccacagcatcgaggaaggcctcaagattcaggccctgaacagactgcagagagggaag
aaacaccagatcgagaatggcagcggggcagaagacaatggcgacagctcgcactgcagt
aatgcctctgtccacagtaaccaggaggcaggaccaagcatcaaacgcaccaagacctca
gatgactctggtctggacatggacaacaccacagagaacggaggaggagacacagctctg
gatggagccagtgaaatcgagctcgtcttcaggcctcatcctactcttatggagaaggaa
gacgctgcccaaaccaggtacattaagacctctggcaacgcaacagtcgatcacctctca
aaatacctggctgttagactcgctctggaggaactgcgcaagaacggagaggccagtcct
atcaacgtggaggctgccagcgagaaacagtacaccatctacatacctacacccaacaac
cagttcacagtcctcaatggctccttctccctggagctggtgagtgagaaatactggaag
gtcaacaaacccatggagctctactttgccccgactaaggagcacaaataa
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integrated database retrieval system
