Tachysurus fulvidraco (yellow catfish): 113643696
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Entry
113643696 CDS
T08119
Symbol
msi2b
Name
(RefSeq) RNA-binding protein Musashi homolog 2b isoform X1
KO
K14411
RNA-binding protein Musashi
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
113643696 (msi2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tfd03019
]
113643696 (msi2b)
Messenger RNA biogenesis [BR:
tfd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
113643696 (msi2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
PHM7_cyt
TASOR_alpha-beta
Motif
Other DBs
NCBI-GeneID:
113643696
NCBI-ProteinID:
XP_027003887
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Position
11:complement(11775201..12012249)
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AA seq
423 aa
AA seq
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MEGDGSQATSGSPTDSQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKR
SRGFGFVTFADAASVDKVLGQPHHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSAN
TVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMV
ECKKAQPKEVMFPPGTRGRARGLPYTMDAFMLGMGMLSYPNIVATYGRGYTGFAPSYSYQ
FPGFPAAAYGPMAAAAVAAARGSGRGARGRGGYAVYPHHTGPGFPDYGFYSTTSDQRGPP
FSFADYGSLGPQAAQLLQSEHATSACNSPLQHLPSPDQYKSPGTNPPRPGTFPGASSPGP
VADLYGPTSQDSGVGNYISAASPQPGSGFGHSIAVTAIQLQALQRGTDTDELRWQDLKNK
RNV
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atggagggagacgggagccaagccacgtccgggagtccgaccgattcgcaacacgaccca
ggtaaaatgtttatcggtggcctcagctggcaaacttcaccagacagccttagagactat
tttagtaaatttggagaaatccgagaatgtatggtgatgagggatcccacgaccaagcgc
tccaggggatttgggtttgttacgtttgcagatgcggccagtgtagataaagttttaggt
caacctcaccacgaattagactcaaagacgatcgaccctaaagttgccttcccgagacgt
gctcaacccaagatggtcacaagaacaaagaaaatatttgtaggcggattatcagctaac
acagtagtcgaagatgtgaagcagtatttcgaacagtttggcaaggtagaggatgccatg
cttatgtttgataaaactacaaataggcatagaggatttggctttgttactttcgagaat
gaggatgtggtggagaaagtctgtgagattcattttcatgaaatcaataataaaatggta
gaatgtaagaaggctcaacccaaggaggtcatgtttccaccagggacacgagggcgagca
aggggtctaccctacaccatggatgccttcatgctaggaatgggaatgctgagttaccca
aacattgtagcaacgtacggccgtggatacactggcttcgccccgagctacagctaccaa
ttccctggctttcctgcggcggcatacggtccgatggcggcagcagcggtggcagcagca
cgtggttcaggtaggggggcccgtggaagaggcggctacgcagtatatccacaccacaca
gggccaggcttccccgattacggtttctattccacgacaagtgaccaacgggggcccccc
ttctcctttgcggactatggctccctaggcccgcaggcggctcagctgcttcaaagcgag
catgccacctcggcctgcaactcccccctgcagcacctgcccagcccggatcagtataag
agcccaggcaccaaccctccgcggcctggaactttcccaggtgcgagcagtccagggcct
gtggctgacctgtatggccccaccagccaggactccggcgtgggcaactacataagtgct
gctagccctcaaccaggctctggcttcggccatagtattgctgtaacggccatacaactc
caagcactacagcgtgggacagacacggacgagctgagatggcaggatctgaagaacaaa
agaaatgtctaa
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