Tachysurus fulvidraco (yellow catfish): 113643736
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Entry
113643736 CDS
T08119
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM50
KO
K12024
tripartite motif-containing protein 50/73/74
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tfd04121
]
113643736
Ubiquitin system [BR:
tfd04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
113643736
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SPRY
PRY
zf-B_box
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_4
zf-C3HC4_2
zf-C3HC4_3
TRIM_CC
zf-RING_2
zf-RING_5
Apolipoprotein
RING_XB3-XBAT31
zf-Nse
ATG17_like
zf-RING_6
Sina_RING
MTUS1_CCDC69_CC1
Motif
Other DBs
NCBI-GeneID:
113643736
NCBI-ProteinID:
XP_027003959
LinkDB
All DBs
Position
11:13114573..13119975
Genome browser
AA seq
482 aa
AA seq
DB search
MARRCSLESLEEQLRCPVCLEVFSEPLMLQCGHSYCRGCVRSMGMDPLGQLQCPVCRCAV
DGDSPPPNVSLARIVDALREISEPGQGPPETCNQHHNPLSLYCEEDQTLICGLCGSIGSH
KAHKVTPISSVYSRMKEDISCLLTNFQTQKRKLEEQICKMAYNKSRITNESDVLKWVVRK
EFGELRHWVELEEASFMQKVENTASTLISSIQTQADHMSQLLAKFQEAEGTLEALSNENH
LDFITKYGSIAPRFRESQQREQKNERTYSSISFKPGFNHSDIKMTVWKRLHRRVLPAPEL
LNFDPLTAHPMLHLTEDLTTVKCGVLVNRLPNNPERFSYSYCVLANRGFSSGKHYWEVQV
GEKPKWRLGLIKGTTCRKSKLPKSPEGGVWLIGLKEGRLYEAFTTHRVSLPLMSQPQRLG
VFLDYDRGELTFYNADSPDELGFIYSYQAELQGKVYPLFDVCWHERGANKMPIILPRPFT
EA
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atggccagacgctgcagtctagagtctctagaggagcagctgcgttgccctgtgtgtctg
gaggtcttctctgagccgcttatgctgcagtgcggccactcgtactgccgtggttgtgtg
cgctctatgggcatggatcctctggggcagctccagtgtcctgtgtgtcgctgtgcagtg
gatggggacagccctccacctaatgtttcactggctcgcattgtggatgccctgcgggag
atcagtgaaccaggtcaaggccctccagagacatgcaaccaacaccataatcccctgagt
ctgtactgtgaggaagatcagacactgatctgtggactgtgtggcagcatcggaagccac
aaagcacacaaggtcacgccgatcagcagcgtctacagccgaatgaaggaggacatttcc
tgtctgctgactaactttcagacacagaagaggaaactggaggagcagatttgtaaaatg
gcctacaataagtctcgcattacaaatgagtcggacgtgctgaagtgggtggtgcggaag
gagtttggggagctgcgacactgggtggaactcgaggaggccagcttcatgcagaaggta
gagaacaccgcctcgactctcatctcctcaatccagacccaggctgatcacatgagtcag
ctgctggctaagttccaggaggctgaaggcacactagaagccctgagcaacgagaaccat
ctggactttatcactaaatatggctctatagccccaaggtttcgagagagccagcagaga
gaacagaagaacgagaggacctacagctccatcagctttaagccaggctttaatcacagt
gatatcaaaatgactgtatggaagagattacacaggagagttttaccagctcccgaattg
ctgaattttgaccctctcacagctcacccgatgctgcacctcactgaagacctcaccacg
gtgaagtgtggagtcctcgtcaaccgcctgcccaacaatcctgagcgtttcagctacagc
tactgtgtgctggccaaccgtggcttttcatcaggcaagcactactgggaggtccaggtg
ggagagaaaccaaaatggaggctggggttaatcaaagggactacttgccgtaagagtaag
cttcccaagagccctgagggaggagtgtggctgattgggctaaaggagggtcggctgtat
gaggccttcaccactcatcgtgtctctttgcccctcatgagtcagccacaacgcttgggg
gttttcctggactatgacagaggagagctgaccttttataacgcggacagtccagatgag
cttggattcatttattcctatcaggctgagctgcaggggaaggtctacccactgtttgac
gtgtgctggcatgagcgtggtgccaacaagatgccaataatcctgccacggccattcact
gaagcctag
DBGET
integrated database retrieval system
