Tachysurus fulvidraco (yellow catfish): 113643974
Help
Entry
113643974 CDS
T08119
Symbol
cpsf4
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4 isoform X1
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
113643974 (cpsf4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tfd03021
]
113643974 (cpsf4)
03019 Messenger RNA biogenesis [BR:
tfd03019
]
113643974 (cpsf4)
Transcription machinery [BR:
tfd03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
113643974 (cpsf4)
Messenger RNA biogenesis [BR:
tfd03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
113643974 (cpsf4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_3
zf-CCCH_2
zf-CCHC
zf-CCCH_4
zf-CCHC_3
Nab2-like_zf-CCCH_
zf-C3H1
Motif
Other DBs
NCBI-GeneID:
113643974
NCBI-ProteinID:
XP_027004228
LinkDB
All DBs
Position
24:14147239..14151502
Genome browser
AA seq
271 aa
AA seq
DB search
MQEMIANVDHLKFDLEIAVEQQLGAQPLPFPGMDKSGAAVCEFFMKSACLKGGMCPFRHI
SGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESK
IKDCPWYDRGFCKHGPDCRHRHTRRVICVNYLVGFCPEGKSCKFMHPRFELPMGTNEQPP
LPQQVQTQQKQNAQNLNRSSLSLIQLTSNNSNANSNHQKPLHILGVSQPQNNTGGSRGPR
PLDQVTCYKCGEKGHYANKCTKGHLAFLSGQ
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgcaggaaatgatcgccaacgttgatcatttaaagtttgatctggagatcgctgtggag
cagcagttaggggctcaaccgctgcctttcccaggaatggacaagtcaggtgcagccgta
tgcgagtttttcatgaaatctgcttgtctaaaaggtggaatgtgtccttttcggcacatc
agtggagaaaaaacggtggtttgtaaacactggcttcgaggattgtgcaagaaaggagat
cagtgtgaatttctgcacgagtatgacatgacgaagatgccagaatgctatttctactcc
aagtttggggaatgcagtaataaagaatgtcctttcctacacattgatccggaatctaag
attaaagattgtccgtggtacgaccgagggttctgcaaacacggcccggattgccggcac
agacacacgaggagggtcatctgtgttaattatctcgtcggattctgtcctgagggcaag
tcgtgcaagttcatgcacccacgcttcgagctgcctatggggacaaacgaacagcctcct
cttcctcagcaagtccagacccagcaaaagcagaatgcacagaacttaaacagatcatcg
ttgtcactgattcagttaaccagcaacaactctaatgccaatagcaaccatcagaaacct
ttacacattctcggagtgtcacagcctcagaacaacacgggtggctcccgaggccctcgt
ccgctggaccaggtcacgtgttacaagtgtggagaaaagggacattacgcaaacaaatgc
acaaaaggacacctggctttcctaagcggacagtga
DBGET
integrated database retrieval system
