Tachysurus fulvidraco (yellow catfish): 113643992
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Entry
113643992 CDS
T08119
Symbol
cacna1ha
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1H isoform X1
KO
K04855
voltage-dependent calcium channel T type alpha-1H
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd04010
MAPK signaling pathway
tfd04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
113643992 (cacna1ha)
04020 Calcium signaling pathway
113643992 (cacna1ha)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tfd04040
]
113643992 (cacna1ha)
Ion channels [BR:
tfd04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
113643992 (cacna1ha)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
BHD_1
Motif
Other DBs
NCBI-GeneID:
113643992
NCBI-ProteinID:
XP_047664011
LinkDB
All DBs
Position
24:13890549..13970950
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AA seq
2323 aa
AA seq
DB search
MTDGEGRERFQYLESGEVRVPVAVLYRAHGHGHAAEDEEKGSTWGPDGSEGSNSSETRGG
GGGDAPAPDGGSEEQEQQPYPALAPVVFFCIKQTTRPRNWCLRVVCNPWFEHVSMLVILL
NCVTLGMFQPCEDVACQSEWCIILQAFDDCIFAFFAVEMVIKMMALGIFGSKCYLGDTWN
RLDFFIVMAGMMEYSLDGHNASLSAIRTVRVLRPLRAINRVPSMRILVTLLLDTLPMLGN
VLLLCFFVFFIFGIVGVQLWAGLLRNRCFLDNNAKDLYNLSFMSPYYMHEDGEESPFICS
TIINGMLKCTDVPHYKEGEMECDLNASLGHTLSGPDIKNGCVNWNQYYSVCQPGELNPHK
GAVNFDNIGYAWIAIFQVITLEGWVDIMYYVMDAHSFYNFIYFILLIIVGSFFMINLCLV
VIATQFSETKQRENQLMQEQRARYMSNDSTLASYSEPGSCYEELLRYISHLYRKVKRRAY
RLYHGWQSKRRKKVNPNSGGLPGGGGANGHGRQKSGGHWARSVHNLVQHHQHHHCHLSNG
SPSPQAIAESTDVLEMRFITSGVQLTVPSQSPPGLDLSPGHQSVHSIFQGDFHEAPQICT
GTTAGVTPLGRFNGGMNYPTILPSFICSYTGSNVTAKGRLEANNSTADIVDPFEKIQHLT
GEHSHRRLMLQMAGVEPTSLLFEVLGCPYCAQALENIDLDLADSECSQSEGEVVHEFSRR
ARFKLGHLRHHKKLEERNRLMRYWDNFRDRMKRIVDSKYFNRGIMIAILINTLSMGIEHH
KQPDELTDVLEISNIVFTSMFVLEMIFKLLAFGLFGYIKNPYNIFDGIIVVISVWEIIGQ
ADGGLSVLRTFRLLRVLKLVRFLPALRRQLVVLMKTMDNVATFCMLLMLFIFTFSILGMH
LFGCKFSLKLENGDTIPDRKNFDSLLWAIVTVFQILTQEDWNVVLYNGMASTSPLAALYF
VALMSFGNYVLFNLLVAILVEGFQAEGDATKSDGDDEKRSVNFEEEEKMGELRATAELKM
YSLMMSANGHVDTHGNLPPPIIMRTAATPMPTPKSSLGTDSIFSLEESRRGSGISIDPIA
YDQRSLASPRKSPCHPCSTSSNWGSRRSSWNGLSRAPSLKRKDTSGERESLLSGEGRGSF
EDEEPGGIMLGKTGSASGSSLHHPSSLDFPELPTLPSLCPSGEYHDCNGRALHLSRELPS
ELSREDSTTEEDLDDSFCFRLKRMLHAYKPKWCKSHEDWSLYIFSPRNRFRMLCQRIISH
KIFDHVVLVFIFLNCITIALERPHIQSNSPERLFLSISNYVFTVIFVAEMTVKVVALGFY
SGKHSYLQSTWNVLDGILVFVSLIDILVSLASTGGNKIFGILRVLRLLRTLRPLRVISRA
PGLKLVVETLITSLRPIGNIVLICCAFFIVFGILGVQLFKGKFYHCEGLDTRNITNKSDC
LQANYKWIRRKYNFDHLGQALMSLFVLSCKDGWVNIMYDGLDAVGVDQQPVRNHNPWMLL
YFISFLLIVSFFVLNMFVGVVVENFHKCRQDQEEEEARLREEKRQRLMEKRRRSKENCGS
EAQQRPYYADYSPARLYIHTLCTNHYLDLFITFIICINVVTMSIEHYNQPMYLEEALKYC
NYVFTVFFILEALLKLVAFGFRRYFKDRWNQLDLAIVLLSIMGITLEEIKMNAALPINPT
IIRIMRVLRIARVLKLLKLATGMRALLDTVMQALPQVGNLGLLFMLLFFIYAALGVELFG
KLECTDDNPCEGLSRHATFENFGMAFLTLFRVSTGDNWNGIMKDTLRECPSEDKQCLSYL
PLVSPAYFVTFVLMAQFVLVNVVVAVLMKHLEESNKEAKDDAEMDAEIELEMEMARRLSN
VSARSSGGPEYRGTYMGPRAHSPRQDERMQRTQENLLSPRKMSVSRMHSLPNDSYMFRPV
RPASAPYPLQEVQPTQAYLELGSVTSIHSQPCEGHSLLQVPGVHPQPHISICMPRIPTPK
SSPLHAVGRHLRRQEVIKNDSIDVQMYDSKGNPDKHVRGTRASMTLPVPQISSPSTPLVS
HFLPSYCDMSSVCTLQHSHQQRIIPLPSSRASSSPSDSMLDLADPADEEVHHINSSARLW
AGFPAEGRCHSLSPYIEPWPLPVKNCTSATNLTSYSTKDKDFKFFSVDTRGFLDKPSCCE
DHRRHSIEICSSVDNNAFEQEVGEKRYLPIRGQSLHIPRKKKTSPPCISVDPPLEMELPP
SLASMRKLSESTLLRRRTPSYELALQRDSLDFLEHQLPSRPFIKVERQISHCGEYLSLPR
FPFHKSDSSSCILRESNPSAQPPRFDSALEESTDFSTVNRTAQ
NT seq
6972 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatggcgaagggagagagcgctttcaatacctggagagtggtgaggtgagagtt
ccggtggcggtcttataccgggcgcacggtcatggccacgctgccgaggatgaggagaaa
ggcagcacatggggcccggatggctctgaaggctctaacagctctgaaactcggggtggt
ggtggcggtgatgcccctgctccggatggtgggtctgaggagcaggagcagcagccgtac
cctgcgctcgcgcctgtcgtctttttctgcatcaaacagaccacgcggccacggaactgg
tgcctccgggtggtttgtaacccctggttcgagcatgtgagcatgctggttatacttctg
aactgtgtgaccctgggcatgttccagccctgtgaggacgtcgcgtgccagtctgagtgg
tgcatcatcctccaggcatttgatgactgcatctttgcctttttcgctgtggagatggtt
atcaagatgatggctctggggatttttggatctaagtgttaccttggagacacttggaat
cgcctggacttctttattgtcatggctgggatgatggagtactcactggatgggcacaat
gccagcctgtcagccatccggactgtgcgtgtactcaggcctctacgagccatcaacaga
gtccctagtatgaggatactggtgactctgctcctagatactctgcctatgttaggcaat
gtcctcctgctgtgcttttttgtgttctttatattcggcattgtcggggtgcagctttgg
gctggtcttttaaggaacaggtgtttcctggacaacaacgcgaaggatctgtataatctg
tccttcatgagtccatattacatgcatgaggacggggaggagagcccatttatctgctcc
actataattaacggcatgctcaagtgcaccgacgtgccccattacaaggagggtgagatg
gagtgcgatctaaatgcatcccttggacacaccttgtctgggcctgatatcaagaacggt
tgtgtgaactggaaccagtactacagtgtgtgtcagcccggggagctcaaccctcacaaa
ggggctgtgaattttgacaatattggatatgcttggattgctattttccaggttatcact
ttggagggatgggtagacatcatgtattatgttatggatgcccattccttttacaatttt
atatattttatattgcttattatagtgggatctttcttcatgatcaatttgtgcctggtt
gtgatcgcaacccagttctcggaaactaagcagcgagagaaccaactaatgcaggagcag
cgtgcacgctacatgtccaacgatagcacactagccagctactcagagcccggcagctgt
tatgaggagttgctcaggtacattagccacttgtaccgcaaagtgaagcgtcgtgcatac
cggctctaccatggctggcagagcaagcgtaggaagaaggtcaaccccaacagtggcggc
ttgccagggggtggaggggccaatgggcatggcagacagaagagtggtgggcactgggca
cgctccgtccacaaccttgtccagcaccaccagcaccaccactgtcaccttagtaatggc
agcccaagcccccaggcgatagcagaaagcactgatgttctggagatgaggtttatcaca
tcaggagtacaactgacggtgccctcgcagtcacctcctgggttggatctatcaccagga
caccagtcagtgcacagcatctttcaaggtgactttcacgaggccccacagatttgcaca
ggcaccacagctggagtgactcctctggggagatttaatgggggcatgaactatcctacc
attttgccctccttcatctgcagctatacaggcagcaacgtcacagccaaaggtagactc
gaggccaacaacagcactgcagacatcgtggatccttttgaaaagatacagcatctgaca
ggagagcacagtcacaggcgcttaatgctgcagatggccggggtagagccaacgtccctg
ctctttgaggttctcgggtgtccatactgtgcccaggctctggagaacattgatctggac
ttagctgactctgaatgctcccagtctgaaggcgaggtggtgcatgagttttcccgccgt
gcaaggtttaaactcggacacttgcgtcaccacaagaagcttgaggagcgcaaccggttg
atgcgctactgggacaacttcagagacaggatgaaacgcatagtggatagcaagtacttt
aaccgtgggattatgatcgctatcctcatcaacacattgagcatgggaatagagcatcac
aagcagcctgatgaactgacagatgttctggagattagcaatattgtctttaccagcatg
tttgtccttgagatgatcttcaagctgttggcctttggtctcttcggctacatcaaaaac
ccatataatatatttgatgggatcattgttgttataagtgtatgggagattattggacag
gctgatggaggtctttcggtgctcaggaccttccgtctgttgcgtgtgctcaagctggtg
cgcttcctacctgctctgcggagacagctggtggtactgatgaagacaatggataacgtg
gccaccttctgcatgctgctcatgctcttcatcttcaccttcagtattcttggaatgcat
ctgtttggctgcaaattcagcctgaagttggagaatggagacaccattccagacaggaag
aactttgactctctgctgtgggccatcgtcactgtgtttcagatactaactcaggaggac
tggaacgtggtcctctataatggaatggcatccacgtctccactggctgcactttacttt
gtggccctgatgagctttgggaattacgtcctatttaatcttctggtagccatcttggta
gagggctttcaagcagagggagatgccaccaaatctgacggagatgatgagaagaggtca
gttaattttgaagaagaggagaagatgggagaattacgtgccacagcagagttgaagatg
tactccctgatgatgtctgcaaatgggcatgtggacactcatggtaatttgcctccaccg
atcatcatgcgcacagctgccactcctatgcccacaccaaagagctcgcttggcacagac
tcaatcttcagtttagaggaatcaaggcgtggcagtgggatttccattgatccaattgct
tacgatcagagatcactggccagcccacgtaaatcgccctgccacccgtgtagtacaagc
agtaactggggcagtcgcaggtcgagctggaacggcctgagtagagcaccaagtctaaag
aggaaagacacatctggggagagggagtctctgctctctggtgagggcagaggcagcttt
gaggatgaggaaccagggggaatcatgctgggaaaaacaggcagtgccagtggtagctct
ctgcaccaccccagttctctggactttcctgagctgcccacactccccagtctgtgccca
tcaggagagtaccacgactgcaacggcagggcattacacctctccagagagctgccctct
gagctgagccgcgaggactcgaccacagaggaggatctagatgatagtttctgttttcgc
ctgaagaggatgctgcatgcgtataaacccaagtggtgtaaaagtcatgaggactggtct
ctctatatattctctccacggaacaggtttcgaatgctctgccagaggatcatttcacac
aagatttttgaccatgtggtcttagtctttatcttccttaactgtatcaccattgctctg
gaaaggccacacattcaatccaacagcccagagcgactgttcctcagtatttccaattac
gtattcactgtgatatttgttgctgaaatgactgtgaaggtggtggctcttggcttttat
tcaggaaagcatagttatctacagagcacctggaacgtcttggatggaattttggtgttt
gtttcactcattgacatcctggtgtccctggcatccactggagggaacaagatctttggg
attctgagggttctacgtctgctaaggacactgaggcctttaagagtgatcagtcgcgct
cctggactgaagctggtggttgaaacattgataacgtcactgaggcccatcgggaacata
gtactgatctgctgcgcgttcttcatcgtctttggcatccttggagtgcagctcttcaaa
ggcaagttttaccactgtgaaggcttggacacaagaaacatcacaaataaatcagattgc
ctgcaagccaactacaaatggattcggagaaagtacaatttcgatcatttggggcaggct
ctcatgtcgttgtttgtgctgtcttgtaaggacggctgggtgaatatcatgtacgatggc
ctggatgctgtaggtgtagaccaacagccggtacgtaaccacaacccctggatgctgctt
tacttcatctccttcctgctgattgtgagcttcttcgtgctgaacatgttcgtgggtgtg
gtggtggagaacttccacaagtgtcggcaagaccaggaagaagaggaggcacgcctgcgt
gaggagaagaggcagcggttgatggagaaaaggcgcaggagtaaggagaattgtgggtct
gaagcgcagcagcggccctactacgcagattactcaccagcccggctctacatccacaca
ctgtgcactaaccactacctggacctcttcatcaccttcatcatctgcatcaacgtggtc
accatgtccatagagcactacaaccagcccatgtatctggaagaagcgttgaagtactgc
aactacgtcttcactgtcttcttcattttagaagcccttctcaaacttgtcgcattcggc
ttccgaagatacttcaaagacaggtggaaccagttagacctggccattgtgcttctctcc
atcatgggcatcacattggaggagatcaagatgaacgctgctcttccaatcaaccccact
atcatccgtatcatgagggttctgagaatagctcgagtgctgaagcttttgaagttggct
acgggcatgagagcattgctggacactgtgatgcaggctctaccacaggttggaaatctg
ggcttgctgtttatgcttctcttcttcatttatgctgcactcggcgtagagctttttggg
aaattggaatgcacagacgataacccatgtgaaggactcagtcgacatgccacattcgag
aactttggaatggccttcctaaccctcttcagagtttcaactggtgataattggaatggt
ataatgaaggacactctgagggagtgtccttcggaagataagcagtgcctgagctacctg
ccattggtatcccctgcatactttgtcacctttgtgctgatggcccagtttgtgctggtg
aatgtggtggtggctgtgctgatgaagcacctggaggagagcaataaggaggccaaagac
gatgctgagatggacgcagagattgaattggagatggagatggctcgacgtctcagtaac
gtttcagcaaggagctctggtggtccagagtacaggggcacgtatatggggccaagggca
cattcacctagacaggatgagcgaatgcaaagaactcaggagaatttgctatcaccacga
aagatgtcagtgtccaggatgcattctttgcctaatgacagttacatgtttcggcctgtg
aggccagccagcgcgccgtaccctctgcaggaagtgcagccaactcaagcataccttgaa
ttaggctcagtgacctcgatccactcacagccttgtgaaggtcattccttgctccaggtt
cctggtgttcatcctcagccccatattagtatttgcatgcctaggatccccactccaaag
tcatctcccctgcatgctgtaggcaggcatctacgtagacaggaagtaatcaagaatgac
tcaatcgatgtgcaaatgtatgactccaaaggcaacccagacaagcatgttaggggtaca
agagccagcatgacgctcccagtgccgcagatctcctcccccagcacccccctggtgtct
catttcctaccctcttactgcgacatgtccagtgtctgcacgctccaacactctcaccaa
cagagaattattcccttaccatccagccgggccagcagcagccccagcgactctatgttg
gacttggcggatccagccgatgaggaggtgcaccatatcaacagctccgccaggttgtgg
gcaggattcccagcagagggccggtgccactctctgtctccctacatcgaaccgtggccg
ttgcctgtgaagaactgtaccagtgccaccaatcttaccagctacagcactaaagacaag
gactttaagttcttcagtgtggacaccaggggatttttggacaagccgtcctgttgcgag
gatcatcgccggcactccattgagatttgctcttcggtggacaacaatgcatttgagcaa
gaagtaggtgaaaagaggtatctgcccattcgtggacaatcattgcacatccccagaaag
aagaagacgagtcctccttgtatctctgttgacccacctctagaaatggagctcccacca
tctctcgcatccatgagaaaactgtccgagagcacgctactgcgtcgaaggacgccatcg
tatgaactagccctacagcgtgactctctagacttcctggagcaccaactcccaagtcgg
cctttcatcaaagtggagagacaaatctcacactgtggtgaatatctctctctcccacgg
ttcccctttcacaagtcggactccagttcctgcatcctgcgtgaaagcaacccatcagca
cagccgcctcgcttcgacagcgcactggaggagtctacagatttcagcacagtaaacagg
actgctcaatga
DBGET
integrated database retrieval system
