Tachysurus fulvidraco (yellow catfish): 113644100
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Entry
113644100 CDS
T08119
Symbol
copb2
Name
(RefSeq) coatomer subunit beta' isoform X1
KO
K17302
coatomer subunit beta'
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tfd04131
]
113644100 (copb2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tfd04147
]
113644100 (copb2)
Membrane trafficking [BR:
tfd04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
113644100 (copb2)
Exosome [BR:
tfd04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
113644100 (copb2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
Beta-prop_WDR75_1st
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_IFT122_1st
ANAPC4_WD40
Beta-prop_IFT140_1st
PEP5_VPS11_N
Beta-prop_SCAP
Beta-prop_HPS5
WDR90_beta-prop_4th
Beta-prop_SPT8
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_Vps41
Beta-prop_WDR19_1st
Beta-prop_LRRK2
Beta-prop_WDR35_TULP_N
HEAT_GCN1
Motif
Other DBs
NCBI-GeneID:
113644100
NCBI-ProteinID:
XP_027004456
LinkDB
All DBs
Position
1:21220133..21229312
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AA seq
936 aa
AA seq
DB search
MPLRLDIKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDVPV
RAAKFVARKNWVITGADDMQIRVFNYNTLERVHMFEAHSDYIRCFAVHPTQPYILTSSDD
MLIKLWDWEKKWTCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFT
LEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCVSFHPE
LPIIVTGSEDGTVRIWHSSTYRLENTLNYGMERVWCVCGLRGSNNIALGYDEGSIIIKLG
REEPAMSMDTNGKIIWAKHSEVQQANLKAMGDTEIKDGERLPLAVKDMGSCEIYPQTIQH
NPNGRFVVVCGDGEYIIYTAMALRNKSFGSAQEFVWAHDSSEYAIRESSSVVKIFKNFKE
KKSFKPDFGAEGIYGGFLLGVRSVNGLAFYDWENTELIRRIEIQPKHIFWSDSGELVCIA
TEESFFILRYMADKVAASQESNEGVTEDGIEDAFEVQGEIQEIVKTGLWVGDCFIYTSSV
NRLNYFVGGEIVTIAHLDRTMYLLGYIPKDDRLYLGDKELNIVSYSLLVSVLEYQTAVMR
RDFSMADKVLPTIPKEQRTRVAHFLEKQGFKQQALAVSTDPEHRFELALQLGELKIGYQL
AVEAESEQKWKQLAELAISKCQFGLAQECLHHAQDYGGLLLLATASGNGAMVSKLAEGAE
RDGKNNVAFMTYFLQGKLDQCLELLIRTNRLPEAAFLARTYLPSQVSRVVKLWRESLAKV
NQKAAESLADPTEYENLFPGLKEAFVAEQYLRETCLGNSRPATDYPLVTANEERNVLEEA
SSYDPKSILHTNTKQAADPEEATEEAEPVPTVTATPVAAPVASVAPPKPEPVKKEMDDMT
MFREKTLEELEDDLDNLDLDDIDTTDVNLDDDFLDD
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atgcctctcaggctggacatcaagcgcaagcttacagctcggtcagaccgagtcaaaagc
gtggatctccatcccaccgagccatggatgctggccagtctctacaacggcagcgtgtgc
gtctggaaccacgaaacacaaaccttggtgaagacatttgaagtgtgtgacgttccagta
agagctgcaaagtttgttgctcggaagaactgggtcataaccggagcagacgacatgcag
atccgagttttcaactacaacacattggagcgggtgcacatgttcgaggcacattcagat
tacatccgctgcttcgccgtgcatccgactcagccctacatccttactagcagtgatgat
atgctcattaagctgtgggactgggagaagaaatggacgtgcagtcaggtgtttgagggc
cacacacactatgtcatgcagattgtcatcaaccctaaagacaacaaccagtttgcgagt
gcatcactggacagaaccatcaaggtgtggcaactgggttcctcgtcacccaacttcact
ctggagggacacgagaaaggcgtgaactgcattgattattacagcggcggagataagccg
tatctcatttcaggtgctgacgacaggttggtgaagatctgggactatcagaataagacg
tgtgtgcaaacactagagggtcacgcccagaacgtatcctgcgtcagcttccaccccgag
ctgccgatcatcgttacaggatccgaggatggtactgtacgtatctggcactccagcacc
taccgcctggagaacacgctgaactacggcatggagagggtgtggtgcgtgtgtggcctg
cgcggttccaacaacatcgcgcttggttatgatgagggcagcattattattaagcttggt
cgtgaggagcccgccatgtccatggacacgaacggtaagattatctgggcaaagcattcg
gaggtacagcaggcgaacctgaaggccatgggagacacggagattaaagacggagagagg
ctgccactagctgtcaaagacatgggcagttgtgaaatctacccgcagactattcagcac
aaccctaacggaagatttgtggtggtatgcggagacggagaatacatcatctacacagcc
atggctctgaggaacaagagcttcggttcggcgcaggagtttgtctgggcccatgattct
tctgagtatgcaatccgagagagcagcagcgtggtgaaaatcttcaagaactttaaggag
aagaagtccttcaagcctgactttggagcagagggtatctatggcggctttctgctgggt
gtcaggtccgtaaacggtttggctttctacgactgggaaaatacggagctgatacggcgc
atcgaaatccagcccaaacatatcttctggtcagactctggagagctggtgtgcatcgcc
acagaggagtcgttcttcatcctgcgctacatggcagacaaagtggctgcgtcacaagag
tccaatgaaggggttactgaagatggcattgaggatgcttttgaggtccaaggtgagata
caggagattgtaaaaacaggtctgtgggtgggagactgcttcatctacaccagctctgtc
aaccggctgaactactttgttggaggagagatcgtcaccattgctcacctggataggacc
atgtacctgctgggctacatccctaaagatgaccgcctgtacctgggtgacaaggagctg
aacatcgtcagttactcgctgctggtgtcagtgttggagtaccagacggccgtcatgcgg
cgcgacttctctatggccgacaaagtgctccccacaattccaaaagagcagaggaccagg
gtggcccacttcctagagaagcagggtttcaaacagcaagcactggctgtgtccactgac
ccagagcacaggtttgagctggctctacaactaggggaactgaagattggctaccagcta
gcagtagaagcagagtctgagcaaaagtggaagcagctggcagagctggctatcagtaag
tgccagtttggcttggcacaggagtgccttcatcacgcccaggactatggaggcctgctg
ctcttggctacagcctctggcaatggtgctatggtgagcaaactggctgagggtgctgaa
cgtgacggcaagaacaacgttgccttcatgacctacttcttgcaggggaagttggaccag
tgtctggaacttctgattaggaccaaccgcttgcctgaggccgccttccttgctcgcacc
taccttcccagccaagtgtccagagtggtaaagctgtggagagagagcctggcaaaggtt
aaccagaaagccgcagagtcgctggccgaccccaccgaatacgagaacctgttccctggg
ctgaaagaggctttcgtggctgagcagtacctaagagagacctgcttgggaaatagcaga
ccggccactgattatccactggtcacggccaatgaggagcggaacgtgctagaagaagcg
agtagttatgatcccaaaagcatacttcacaccaatacaaagcaggctgctgaccctgag
gaagctacagaagaagctgaacctgtacccacagtcacggctactcctgtagctgcaccg
gtagctagtgtggctcctccaaaaccagaacctgttaaaaaagagatggatgacatgaca
atgttcagagaaaagactctggaggaactagaggacgatttggacaacctggatctggac
gacattgacactacagacgtcaacctggatgatgacttcttagatgactga
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