Tachysurus fulvidraco (yellow catfish): 113644289
Help
Entry
113644289 CDS
T08119
Symbol
rnf115a
Name
(RefSeq) E3 ubiquitin-protein ligase RNF115 isoform X1
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tfd04131
]
113644289 (rnf115a)
04121 Ubiquitin system [BR:
tfd04121
]
113644289 (rnf115a)
Enzymes [BR:
tfd01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113644289 (rnf115a)
Membrane trafficking [BR:
tfd04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
113644289 (rnf115a)
Ubiquitin system [BR:
tfd04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
113644289 (rnf115a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-rbx1
zf-RING_UBOX
zf-C3HC4
Zn_ribbon_19
zf-RING_5
zf-Nse
zf-ANAPC11
zf-C3HC4_3
DUF8608
FAR1_N
C1_2
HypA
DUF7560
zf-RING_6
Pcf11_C
Motif
Other DBs
NCBI-GeneID:
113644289
NCBI-ProteinID:
XP_027004770
LinkDB
All DBs
Position
3:complement(21020095..21028987)
Genome browser
AA seq
311 aa
AA seq
DB search
MAEAAAVPPHRFFCHCCKGEVRPKLPEYICPRCDSGFIEEVTEDSSLLDSSTNGLDDTAS
QFAELWQLLFVERPFTVDLDSPDSEPRVPGGPGGLGLGGGPFGGSVPGGLSVNLGGPLGG
GGDHWGPSRPPRLHTQRRYRSRGSSRPDRSPAVEGIVQQFLAGLFANSGAPGSPPLSWTG
MLHSNPGDYAWGQGGLDAVITQLLGQFENTGPPPAEKEKISSLPTVIVSQEQADSSLECP
VCKEDYTVGEPVRQLPCNHFFHSDCIVPWLELHDTCPVCRKSLSGGDSGNQPPSEPSSVN
TEPRTQERWSY
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggctgcggcagtccctccgcatcggtttttctgtcactgttgtaaaggcgaa
gtgagaccaaaactcccggagtatatctgccccagatgtgactctggatttattgaggaa
gtgacggaagactccagtcttttggacagtagtacaaatggccttgatgacacagcgtca
cagtttgcagagctctggcagcttctgtttgtggagcggccgttcacagtggacctggac
agccccgactcagagccacgggttccaggtggtcctggaggacttggtttgggaggaggg
ccgtttggtggctccgtccctgggggactcagcgttaacctgggtggccctttaggagga
ggaggagatcattggggccccagccgtccccctcgcttgcacactcagagaagatacaga
tccagaggaagcagtcggccggatcgctcccctgctgtagagggaatagtacaacagttt
cttgctggcctttttgccaattcaggtgctccaggttcccctccactgtcatggacgggc
atgttgcactcaaaccctggtgactatgcctgggggcaggggggtcttgatgcagtcatt
acacagttactgggtcagtttgagaacacaggtcctccccctgcagagaaagagaaaatc
tcctccctccccacggttatcgtttctcaggaacaggctgacagcagcttggagtgtcca
gtgtgtaaggaggactacacagtcggggagccagtcaggcagctgccctgtaatcacttc
ttccacagtgactgcattgtgccctggctagaactgcatgacacatgtccggtatgcagg
aagagtttgagtggaggggacagtggcaatcagccaccctcagagccctcctctgtaaac
accgagccccgcacacaggagagatggtcctactga
DBGET
integrated database retrieval system
