Tachysurus fulvidraco (yellow catfish): 113644343
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Entry
113644343 CDS
T08119
Symbol
brf1b
Name
(RefSeq) BRF1 RNA polymerase III transcription initiation factor subunit b
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tfd03021
]
113644343 (brf1b)
Transcription machinery [BR:
tfd03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
113644343 (brf1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
BRF1
Zn_Ribbon_TF
Cyclin_N
Zn_ribbon_tTFIIB
RB_B
Motif
Other DBs
NCBI-GeneID:
113644343
NCBI-ProteinID:
XP_027004864
LinkDB
All DBs
Position
16:8190904..8244944
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AA seq
694 aa
AA seq
DB search
MSARQCKNCGGADIDIDQARGSAVCTACGSVLEDNIIVSEVQFVENSGGGASAIGQFVSA
DGPTKAPILGTGFHTSLGKESRAQTLQNGKRQIHSLGSQLQLNQHCLDTAFNFFKMVVSK
HLTRGRKMAHVIAACLYLVCRTEGTPHMLLDLSDLLQVNVYILGKTFLLLARELCINAPA
VDPCLYIPRFAHMLEFGEKTHEVSMTALRLLQRMKRDWMHTGRRPSGLCGAALLVAARMH
EFRRTVKEVIGVVKVCEATLRKRLTEFEDTPTSHLTIDEFMRVDLEEECDPPSFTAGQKK
IKIQQLEQELSRKLDEYQGEISSYQEEIETELENSKPKLRGIYAMYAKEDTNGSLSLVSD
LVGDEEETQDEEMEAAAQHLTEEIINQVLPNLEQGPQGGTEAQEQGKEAAELPSDSTRVP
LTLLLGPFPSVASLGLTDSIRQCLSDEGEDEDKSDNGELDLEGIDEDEIEKYILNENEVQ
AKTELWMKQNEEYLREQKEKEERIAKEKEQGIYKEKPKKSSKRREPIRASTAGEAIEKML
EQKKISSKINYDVLRDLNSKGSSSPADKTEEVSGIVPGRKKLTRRKKQPNKSNLGLAKPA
SLMGKRLRPLISSNHKKKRAAIQIVPKAVILPSVTPETPPPDPTPPPVVESGPVAYEEPT
EEEEDEEVEEPCVSALKLMGGNEYGCEVEEEEVF
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcgaggcagtgtaagaactgcggtggagcagatatagacatagaccaggcacgt
ggaagtgctgtgtgcaccgcctgtggttctgtacttgaggacaacatcattgtctctgag
gtgcagtttgtggaaaacagcggaggaggagcgtctgctatcggacagttcgtgtctgct
gatggtcctacgaaggccccaatacttggaaccggcttccacacaagtcttgggaaggaa
tcacgtgctcagacacttcagaacgggaaacgacaaatacacagcctgggcagccagctg
cagctgaaccagcactgcttagacacagccttcaacttcttcaagatggtcgtgagcaag
catctgacaagagggcgcaagatggcccacgtcatagctgcctgcctctatctggtgtgc
cgaacagagggcacccctcacatgctcctggacctgagtgatcttttacaggtgaacgtg
tacattctgggaaagacctttctgctgttggccagagaactttgcatcaacgcacctgct
gtcgatccatgcttgtatattccacgctttgctcacatgttggagtttggagagaaaacc
catgaagtctctatgactgcactgagactgctgcagaggatgaagagggactggatgcat
acaggacgcagaccatctggactctgtggtgcagctctgttggtggcagctcgcatgcac
gaattccgccgcacggtgaaggaggtcattggcgtggtgaaagtctgtgaggcgactctc
aggaagaggctgacagaatttgaggacacacctaccagtcacttgactattgatgagttc
atgcgagtggacctggaggaggagtgcgatcccccgtctttcactgctggtcaaaagaag
ataaagatccaacagctggaacaggagctgtccaggaagctcgatgaatatcaaggtgag
atcagctcctatcaggaggagattgagacagaactggagaacagcaagcctaaactgaga
ggaatttatgccatgtatgcaaaagaagacaccaatggcagtctgtctctggtgtcggac
ctcgtgggagatgaagaggaaacacaagatgaggagatggaggctgcagctcagcacctc
actgaggaaatcatcaaccaggtgttacctaatctggaacagggacctcaggggggcaca
gaggcacaggagcagggcaaagaggcagcagaactgcccagcgactccactcgtgtgcca
ctgactttactgcttggcccgtttcccagcgttgccagccttggtcttacagactccatc
cgccaatgcctgtctgacgagggggaggatgaggacaagtcggataacggcgagcttgat
ctggaaggtattgatgaggacgagatcgaaaagtacattctcaatgagaacgaggtccag
gctaagacagagctgtggatgaagcaaaacgaggagtatctaagagaacagaaagaaaaa
gaagagaggatagctaaggagaaagaacaagggatctataaggagaagccaaaaaagtca
tccaaaaggcgagagcccattcgggccagcactgcaggagaggcaatagagaagatgttg
gaacagaagaagatttcaagcaaaatcaattacgatgtactaagagacttgaacagcaaa
ggcagcagcagcccagcagataagacagaggaagtgtctggtatcgtccctggacgtaag
aagctcactcgccgtaagaaacagcccaacaagagcaatctgggtctggcaaagcctgca
agcctcatggggaaaaggctccgccccctaatatcgtcaaatcacaagaagaaaagagca
gctatacagattgtgccaaaagctgtgatactgccctcagtgactcctgagactcctccc
cctgaccctactcctcctccagtcgttgagagtggccctgtggcatatgaggaacccacc
gaggaagaggaggatgaagaggtggaagagccctgtgttagtgctctgaagctcatggga
gggaacgaatatggctgtgaagtcgaagaggaggaagttttttag
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