Tachysurus fulvidraco (yellow catfish): 113644347
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Entry
113644347 CDS
T08119
Symbol
dync1i1
Name
(RefSeq) cytoplasmic dynein 1 intermediate chain 1 isoform X1
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd04145
Phagosome
tfd04814
Motor proteins
tfd05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
113644347 (dync1i1)
09142 Cell motility
04814 Motor proteins
113644347 (dync1i1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
113644347 (dync1i1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tfd03036
]
113644347 (dync1i1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tfd04812
]
113644347 (dync1i1)
Chromosome and associated proteins [BR:
tfd03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
113644347 (dync1i1)
Cytoskeleton proteins [BR:
tfd04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
113644347 (dync1i1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML
WDR55
Dynein_IC2
WD40
Beta-prop_RIG_2nd
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_EIPR1
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_DCAF4
WD40_RFWD3
Motif
Other DBs
NCBI-GeneID:
113644347
NCBI-ProteinID:
XP_027004889
LinkDB
All DBs
Position
3:27448235..27465937
Genome browser
AA seq
638 aa
AA seq
DB search
MSDTRNRKAKLEHTKQLVAQMHEEKRRKEEERKKKESEVQQMAECASEDPDLDRKRRAMS
PDLSSVQPLHLLTWDTCYFHYLVPTPLSPSSQSVSASSDNWSQESVEGGTVSRTLQWDMD
PSALQLLADSEHRCRMHKLQASEIVQFDYMPKELVTYSKETQTPVAPKLSEGFCTEEEKH
EELPVVKPKPESEAHVVDDSQEAVQEYSKELTEEEKKQILHSEDFLNFFNRSIQLVERTL
TDDLDIFFDYSGRGMEDREGDTQAGLNLSFNQQFYDEQWSKHRVVTCLDWSPQYSELLMA
SYNANEHAPKEPDGVVLVWNMKFKKTAPEYVFHCQSSVMSVGFAKFHPNLIVGGTYSGQI
ALWDNRSHRKTPVQRTPISAAAHTHPVSSIKVVGTQNANNLITVSTDGKMCSWSLDMLSQ
PQDSIELYYSKSKVVAVTGMAFPADDVNNCVVGSEEGPVYSASRHGSKKGIREIFKGHQG
PVTGISCHNAVGPVDFSHLFTTSSFDWSAKLWSTKHNKPLYSFEDNVDYIYDVMWSPVHP
AVFAAVDGMGRLDIWNLNKDTEVPTASVTVERSCALNRVRFSSEGREVAAGDSEGRVWIY
DVGEQLAVPKSEDWSRLAQVLVEIQANTYGESAIEVSS
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacacacgcaacagaaaagccaaactcgagcacacaaaacagcttgttgctcag
atgcatgaagagaaaagaagaaaagaagaagaaagaaaaaagaaagagtctgaggtgcag
caaatggcagagtgcgcatcagaagacccagacttggatagaaagagaagagcgatgtct
ccagacctgtcttcagtgcagccactccaccttttaacatgggatacctgttattttcat
tatttagtccctacccctctgtctccctcttcacaatcagtgagcgcttccagtgacaac
tggagccaggagtcagtggagggaggaaccgtgtctaggacactgcagtgggacatggac
ccctcagctcttcagctcctcgcagactcggagcacaggtgcagaatgcacaaactccaa
gcatcagagattgtacagtttgattacatgcccaaagaactagtgacctacagtaaagag
acccagactcctgtagcaccaaagctgtctgaaggattctgcacagaagaggagaagcat
gaagaacttcctgtggtcaaacccaaacctgaatctgaagcacatgtggtggatgacagt
caggaggctgtgcaagaatattctaaagagctcacagaggaggagaagaagcagatcctt
cactccgaggatttcctgaacttctttaaccgtagcattcagttggtggagcgaacacta
actgacgacttggatattttctttgactacagcggacgtggaatggaagaccgagagggc
gacacacaagctggattaaatctctccttcaaccaacaattctatgatgagcagtggtcc
aaacatcgagttgtcacctgtctggattggtcaccgcagtactcagaattgctgatggct
tcatacaatgccaacgagcacgcaccaaaggaaccggatggagttgtgctggtgtggaac
atgaagtttaagaagacagcaccagaatacgtattccactgtcagtcctctgtgatgtca
gtaggttttgcaaagtttcatccaaacctcatagtcgggggcacttattccggacagatt
gcattatgggacaatcggagccataggaaaactccagtacaaaggacaccgatatctgct
gctgctcatacccatcctgtgtccagcataaaagtggtgggaacccaaaatgccaacaac
ctgatcactgtgtcaacagatggcaagatgtgctcctggagtttagatatgctctctcag
ccccaggatagtatagaactatactatagcaagtctaaggtagtagctgtgactggaatg
gcttttccagctgatgatgtgaataactgtgtggtgggaagtgaagaaggaccagtgtac
tcagcctcgaggcacggcagtaagaaaggtatcagggagatttttaagggccaccagggg
ccagtgactggcatcagttgccataatgctgtgggtcccgttgatttctcccacctgttc
accacttcatctttcgactggtctgccaaactgtggtcaactaaacataacaaaccactc
tactcctttgaggataatgttgactacatctatgatgtcatgtggtctcctgtgcaccca
gctgtctttgctgcagtggatggaatgggtcgcttggacatctggaatcttaacaaagac
acagaagttcctacagcaagtgtgacagtggagcgctcttgtgctctgaaccgggtcaga
ttttcatcagagggccgcgaagtagcagcaggtgattctgagggtcgagtctggatctat
gatgttggagagcaattagcagtgccaaaatccgaggactggagtcgacttgcacaagtt
ctcgtggagattcaagcaaacacttatggagaaagtgcaatagaagtctctagctga
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integrated database retrieval system
