Tachysurus fulvidraco (yellow catfish): 113644418
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Entry
113644418 CDS
T08119
Symbol
emg1
Name
(RefSeq) ribosomal RNA small subunit methyltransferase NEP1
KO
K14568
rRNA small subunit pseudouridine methyltransferase Nep1 [EC:
2.1.1.260
]
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
113644418 (emg1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tfd03009
]
113644418 (emg1)
Enzymes [BR:
tfd01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.260 rRNA small subunit pseudouridine methyltransferase Nep1
113644418 (emg1)
Ribosome biogenesis [BR:
tfd03009
]
Eukaryotic type
90S particles
Other 90S particles
113644418 (emg1)
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Gene cluster
GFIT
Motif
Pfam:
EMG1
Motif
Other DBs
NCBI-GeneID:
113644418
NCBI-ProteinID:
XP_027005055
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All DBs
Position
3:19029795..19032752
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AA seq
238 aa
AA seq
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MAAHTGEKRGLEHLDEYEPKTAKQPRNMHDKMIEARLVVVLEGATLETVKVGKTFELLNC
DQHKNIIIKSGRDPGNIRPDITHQSLLMLMDSPLNRAGLLQVYIHSEKNALIEINPQTRI
PRTFPRFCGLMVQLLHKLSVRAADGPQRLLRMIKNPVSDHLPAGCPRYAMSFKAGDSVCP
RTLVPKDGPAVVVIGAFAHGAVNVDYTEKTVSISNYPLSAALTCSKICSAFEEVWGVL
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atggcggctcacacgggggagaagcgtggtctcgaacacttagacgaatatgaaccaaaa
acagcgaaacagccacgaaatatgcacgacaaaatgatagaggcgcgacttgttgttgtt
ctggaaggagcgacgctggagactgtgaaggttgggaagacatttgagttgctgaactgt
gaccaacacaagaatattataataaagagtggaagggaccccggcaacattcggccagac
atcactcatcagagcctgcttatgttgatggacagcccattgaacagagcaggactgctg
caggtgtacatacattcagagaagaatgctctgattgagatcaatcctcagacacgaatt
cccaggacctttcctcgcttttgtggactcatggtgcagctcctgcataagctgagtgtg
agagcagctgatgggccacagcgcttgctgaggatgattaaaaaccctgtttcagaccac
ctgcctgctggatgcccacgctacgctatgtccttcaaagcaggagattctgtctgcccc
agaaccctcgtccctaaggatggtcctgctgtggtggttattggagcatttgcgcacgga
gcggtaaatgttgactatacagagaagacggtttccatcagtaattatcctctgtctgca
gctctcacatgctcaaaaatatgctctgcgtttgaggaggtctggggggttttgtga
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