Tachysurus fulvidraco (yellow catfish): 113644439
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Entry
113644439 CDS
T08119
Symbol
ptbp2a
Name
(RefSeq) polypyrimidine tract-binding protein 2 isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tfd03041
]
113644439 (ptbp2a)
Spliceosome [BR:
tfd03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
113644439 (ptbp2a)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_PARP14_3
GlcNAc-1_reg
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
113644439
NCBI-ProteinID:
XP_027005083
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All DBs
Position
3:complement(18674205..18689038)
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AA seq
510 aa
AA seq
DB search
MDGISDVAVGVKRGSDELLSSSMYNSPNSGMSSISDGTSNGSDSKKLRVEERVGEAPPSR
VLHIRKLPSEVSETEIIALGLPFGKVTNILTLKGKNQAFLELSTEEAAITMVNYYSAVTP
HIRNVPVFIQYSNHKELKTETNQSGTPTSGSGDGTLSTPSSPVLRIIIDNMFYPVTLDVL
QQIFSKFGTVMKIITFTKNNQFQALLQYNDATSAQQAKVALDGQNIYNACCTLRIDYSKL
VNLNVKYNNDKSRDYTRPELPAGDGQPAVDPSVAVAFGKDSNSLLGKIPGALSPLSAAAA
AAAAAGRVALSGHSGTGVLLVSNLNDEMVTPQSLFTLFGVYGDVQRVKILYNKKDSALIQ
MADMNQAQLAMSHLNGQKMYSKIIRVTLSKHQTVQLPRDGLDDQGLTKDFTNSPLHRFKK
PGSKNFQNIFPPSATLHLSNIPQDITEDDLRVLFNNSGGTVKAFKFFQDRKMALIQLSTV
EESIQCLIDLHNYNMGNNHHLRVSFSKSTI
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atggacggcatcagtgatgttgcagttggtgtgaagagggggtcagatgagctgctgtcc
agcagcatgtacaacagtcccaactccgggatgagcagtatcagtgatggcacatccaat
ggaagtgacagcaaaaaattgagagttgaagagagggttggagaggctcctccatcacgt
gttctccatatcaggaaactacccagtgaggtttcagaaacggagatcattgccttagga
ttgccttttggaaaggtcaccaatatccttaccttgaaaggcaaaaaccaggcattcctt
gagcttagcacggaagaagcagctataaccatggtgaactactattcagctgttacaccc
catattcgaaatgtcccagtcttcattcagtattcaaatcacaaagagctcaagactgag
acaaaccagtctggaacacccacatcaggctccggtgatggaacgctctcaacacccagc
agtccagttttgaggattatcatagacaacatgttctaccctgtcactctagatgtgttg
cagcagatcttctcaaagtttggcacagttatgaaaatcatcacattcacaaagaacaat
cagtttcaggccttgctacaatacaatgatgcaacgagtgcacagcaagctaaagtggca
ctcgatggtcaaaacatatacaatgcttgctgtacacttcgtatagactactccaagctt
gtcaacctgaatgtgaagtacaacaatgataagagcagggattacactagaccagagctg
ccggcgggtgatgggcagcctgctgtggacccctcagtggcagtggcctttggcaaggac
tcgaactcactgctcggtaagatcccaggtgcgttgagtcccctgagtgcggcggcggca
gcagcggcagcagcaggacgagttgctctgtctgggcactcgggtactggagtgctcctg
gttagcaatctcaatgacgagatggttacgccccaaagtctgtttaccctcttcggagtg
tatggtgatgtgcagcgtgtgaagatcctctacaacaaaaaagatagtgcactgatacag
atggcagatatgaatcaggcccaacttgcaatgagtcatctcaatggtcagaagatgtat
tcaaaaatcatccgggtgacactgtccaaacatcagactgtgcagttaccaagagatggc
ttggatgatcaaggccttaccaaggatttcaccaattctcctcttcatcgtttcaaaaaa
cccggctccaaaaacttccagaacatcttccctccctctgccacccttcatttgtcaaac
atcccgcaagacataactgaagatgacctcagagtactgttcaataactccggaggcact
gtgaaagctttcaaatttttccaagatcgcaaaatggctctaattcaattatctacagtt
gaagagtccattcagtgcttgattgacctacacaactacaacatgggcaacaatcaccat
ctgagggtctcattctccaaatcaacaatttaa
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