Tachysurus fulvidraco (yellow catfish): 113644464
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Entry
113644464 CDS
T08119
Symbol
trim71
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM71
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tfd03019
]
113644464 (trim71)
04121 Ubiquitin system [BR:
tfd04121
]
113644464 (trim71)
Enzymes [BR:
tfd01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113644464 (trim71)
Messenger RNA biogenesis [BR:
tfd03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
113644464 (trim71)
Ubiquitin system [BR:
tfd04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
113644464 (trim71)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NHL
DUF4934
Filamin
zf-B_box
DUF5128
SGL
ANCHR-like_BBOX
zf-C3HC4
zf-RING_5
zf-RING_2
zf-B_box_Trim66
zf-C3HC4_4
Ig_GEX2_N
DUF4094
Motif
Other DBs
NCBI-GeneID:
113644464
NCBI-ProteinID:
XP_027005135
LinkDB
All DBs
Position
3:complement(18137791..18167608)
Genome browser
AA seq
809 aa
AA seq
DB search
MASFPDSDVQTCPLCKELCGSSAPISSSSSTSSSSSQTSNSSTTSSTRRLHVLPCLHAFC
RSCLESLRNNGDPLKLRCPTCDQKVPMSESGVDALPSSNFLFSNLLDVVVSTEDQGTSSC
MGSGGLLRAQHVLSEPQCSSCDEGNSASSHCLDCQEYLCDNCVRAHQRVRLTKDHFIESL
AENLHMPGRAGGHGATLSLSQAFHNFSLLPVFQDRMDYCQQHDNAVLRFFCESCSVPICR
ECSVGRHVGHSVSYLQDVLHDSRALTIQLLADAQQGRQAVQLSIEKAQTIAEQVELKAKV
VQSEVKTTTLRHKKALEERECELLWKLEKIRQVKAKSLYLQVEKLHQNLTKLDSTIATVT
KVLEEGRNIDILLAREHMLNQLQELKALRCILQPQEDDRIMFTQPDQALLIAIQSMGLIS
SGAFASATKANGEGLKRALQGKVASFTVVAYDHDGEPRLSGGDGVSVVLMSPEGNLSSAD
VSDHQDGTYTVSYLPKSEGEHILSVLICNQHIEGSPFKVVVKSGRSYGGIGLPVASFGGE
GDGDGQLCRPWGICVDKEGYVIVADRSNNRIQIFKPCGTFHHKFGTLGSRPGQFDRPAGV
ACDSQRRIIVADKDNHRIQIFTFDGHFLLKFGEKGTKNGQFNYPWDVAVNLEGKILVSDT
RNHRVQLFGPDGVFINKYGFEGALWKHFDSPRGVAFNQEGHLVVTDFNNHRLLVIRPDCQ
SARFLGSEGTGNGQFLRPQGVAVDQEDRIIVADSRNHRIQVFEPNGNFLCKFGTQGSGFG
QMDRPSGIAVTPDGMIVAVDFGNNRILIF
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgttccccgattccgacgtgcagacgtgtccgctgtgtaaggagctgtgtggc
tcctctgctccgatctcctccagttcatctacctcctcctcgtcatcgcagacctccaac
tcgtctactacctcgtccacgcgaaggctgcacgtactgccgtgcctgcacgccttctgt
aggtcgtgcctggagagcctgaggaacaacggagacccgctaaagctccgctgccccact
tgcgaccaaaaagtacccatgtccgagtcgggcgtagatgcgttgccctcgtccaacttc
ttgttcagcaacttgctggacgtggtggtgtccaccgaggaccagggcacgagcagctgc
atggggagcgggggtcttctccgtgctcagcacgtgctctcggagccgcagtgcagctcg
tgcgatgaaggtaacagcgcgagctcgcactgcctcgactgccaggagtacctgtgcgac
aactgcgtgcgtgcgcaccagcgcgtccgtctcaccaaagaccacttcatcgagagcctg
gcggagaacctgcacatgccgggacgcgccggtggccacggtgcaacgctcagcctctca
caggcgtttcacaacttctcactgcttccggttttccaggacagaatggactactgtcag
cagcacgacaacgcggtgctgcgatttttctgtgagagttgctctgtgcctatctgtagg
gaatgcagtgtgggaagacacgtgggccacagtgtgtcctacctgcaggacgtgctgcat
gactccagagcgctcaccattcagctgctcgcagatgcacagcagggacgacaggccgtg
cagctaagcatcgagaaagcgcaaacaattgctgagcaggtggaactgaaggccaaggtt
gtgcagtcagaggtgaagaccaccacactgcgtcacaagaaagccctggaggagcgagag
tgtgagctgctgtggaagttggaaaagatccgccaagtgaaggccaagtccctgtacctt
caggttgagaaacttcaccagaacctcaccaagctggacagcaccattgccacagtgaca
aaagtgctggaggaaggtcgcaacatagacatcctactagcacgtgagcacatgctgaat
cagctgcaggagcttaaagcactgcgctgcattctgcagccccaagaggatgaccgaatc
atgttcacacagccagatcaggcgcttctgattgccatccagtccatgggtctgataagc
agtggagcctttgcatcagccaccaaagccaatggagaaggcctcaagagagctttgcag
ggaaaagtagcttccttcacagtagttgcatatgaccatgatggagaaccgaggttgtct
ggtggagatggtgtatcagtggtcttgatgagtccagagggaaacctctccagtgctgat
gtgtctgaccaccaagatggaacctacacagttagctatttgcctaagagtgaaggtgag
catattctttctgtgctcatctgcaaccagcacattgaaggaagtcccttcaaagtagtg
gtcaaatctggccgcagctatggaggtattggtctgcctgttgcatcctttggtggagag
ggtgatggggatggacagctatgtcgaccctggggcatctgtgttgataaggaaggatat
gtgattgtggctgaccgaagcaacaatcgcatacagatcttcaagccatgtggcaccttt
caccacaaatttggcactttgggttctcgacctggtcagtttgaccgacctgccggggtt
gcctgtgacagccagagaagaatcattgtggctgacaaggacaatcaccgcatccagatc
ttcacttttgatggccatttcctcctaaagtttggtgaaaagggaaccaaaaatgggcag
ttcaactacccctgggatgtagctgtcaatttggagggaaagattctggtctcagacaca
cgcaaccatcgagtacagctgtttggacctgatggggtgttcatcaacaaatatgggttc
gaaggtgccctatggaagcatttcgactcacctcgaggagtcgccttcaaccaggaaggt
cacctagtggtgactgacttcaacaatcatcggctgctcgtcattaggccggactgccag
tctgcacgctttcttggctctgagggaacaggtaacgggcagttcttgcgtccacaaggc
gtagccgtggaccaggaggatcgcattattgtggctgactcccgtaaccatcgtattcag
gtgtttgaacccaatggcaacttcttatgcaagtttgggactcagggtagtggctttggg
cagatggatcgcccatcaggtatagccgttacccctgacggaatgattgtagccgtagac
tttggaaacaatcgaatcctcatcttttga
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integrated database retrieval system
