Tachysurus fulvidraco (yellow catfish): 113644482
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Entry
113644482 CDS
T08119
Symbol
rorc
Name
(RefSeq) nuclear receptor ROR-alpha A
KO
K08532
RAR-related orphan receptor alpha
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tfd03000
]
113644482 (rorc)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
tfd03310
]
113644482 (rorc)
Transcription factors [BR:
tfd03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
113644482 (rorc)
Nuclear receptors [BR:
tfd03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
113644482 (rorc)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
113644482
NCBI-ProteinID:
XP_027005170
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Position
3:complement(18841630..18857861)
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AA seq
482 aa
AA seq
DB search
MMRAHIEVIPCKICGDKSSGVHYGVITCEGCKGFFRRSQSSSVQYSCSRQSNCLIDRASR
NRCQSCRLKKCVAQGMSRDAVKFGRMSKRQRDSLFAEVARHQQQQQQQQQRLQASQGDPD
PLPAYRPSKEPRGRPTHLIQPLLPTFPYNLDPELNCPSEVHPYQGSATGEAQAAALAYRS
SQRGGESSSFSTLRVFDSRRSTPETILSIPGSEMGLRVFDTETLFCPYPTTHIEELCASI
FRSHRETGQYCVEELQALRWKFFSREEVLAYQNKSVDEMWQHCAVRLTDAVQYVVEFAKR
IPGFRQLGQNDQIALLKSGSMEVVLVRMSRIFNMENSTVFFDGKFAGTELFKSLACGDFI
ASVFDFAHGLCALRLTEQQVALFSALVLINADRPCLEDRDRVLRVRKDVELALSHILHRD
NQESLLHKLNQKLSLLKNLCTLHIEKLRWFRQYFPVTVHSLFPPLYKELFVSESDIHTMV
TL
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgatgcgagctcatattgaggtcattccttgtaagatctgtggagacaagtcatcaggc
gtgcactatggggtcatcacttgtgaaggctgcaagggatttttccgaaggagtcagtcg
tccagtgtgcagtattcttgctctaggcagagtaactgcctcattgaccgtgccagcagg
aaccgctgccagagctgccgtcttaagaaatgtgttgcacagggaatgagccgagatgct
gtgaagtttggccgcatgtcaaagcgtcaaagagattctctttttgctgaggtggcgagg
catcagcagcagcaacaacaacaacagcagcgtctccaggctagtcaaggtgatcctgac
cctctgcccgcctacaggcccagcaaagagccccgaggtcggccaacacatttaatccag
cccctgcttcccaccttcccctacaacctggacccagagcttaactgcccttcagaggtt
catccatatcagggtagtgccacaggtgaggcccaggctgcagctttggcctacagaagt
tctcaaaggggtggagagagcagcagcttttcaacactgagggtctttgactccagaaga
tctacaccagagaccatcctgagcattccaggaagtgaaatgggattacgagtttttgac
actgaaaccttgttctgtccttaccctacaacacacatagaggagctgtgtgcaagtatt
ttccgctctcacagggaaacgggtcagtattgtgtggaagagctccaggcccttaggtgg
aagttcttcagcagggaggaggtccttgcttaccaaaacaaatctgttgatgagatgtgg
cagcactgtgcagttcgtctgacagatgcagtacagtatgtggtggaatttgcaaagcgc
attccaggcttccgtcagcttggtcagaatgatcaaattgctcttctcaagagtggttcg
atggaagtagttctggtccgcatgagtcggatatttaatatggagaacagcacagtcttt
tttgatggcaagtttgctggaactgaacttttcaagtctcttgcctgtggtgattttatt
gcatcagtatttgacttcgcgcacggtctatgtgctctgaggctgacagagcagcaggtg
gcgctgttcagtgcgcttgtgctcataaatgcagatcgtccatgtctggaggacagagac
agagtgctgagagtgaggaaagatgtggaattggccctcagtcacatcctacacagggac
aaccaagaaagtttactgcacaagctgaaccagaagttgtcactgttgaaaaacctgtgt
acattgcacattgagaaacttcgctggttccggcagtatttccctgtgactgtgcactct
ctcttcccaccactttataaggagctgttcgtctcagaatctgatatacacacaatggtt
actctctga
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