Tachysurus fulvidraco (yellow catfish): 113644498
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Entry
113644498 CDS
T08119
Symbol
bcan
Name
(RefSeq) brevican core protein isoform X2
KO
K06795
brevican
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
tfd00535
]
113644498 (bcan)
00536 Glycosaminoglycan binding proteins [BR:
tfd00536
]
113644498 (bcan)
04091 Lectins [BR:
tfd04091
]
113644498 (bcan)
Proteoglycans [BR:
tfd00535
]
Extracellular matrix (ECM) proteoglycans
Aggrecan / versican family
113644498 (bcan)
Glycosaminoglycan binding proteins [BR:
tfd00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
113644498 (bcan)
Lectins [BR:
tfd04091
]
C-Type lectins
Lecticans
113644498 (bcan)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xlink
Lectin_C
V-set
Sushi
EGF
ig
Ig_3
hEGF
I-set
Motif
Other DBs
NCBI-GeneID:
113644498
NCBI-ProteinID:
XP_027005208
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All DBs
Position
3:19710907..19725400
Genome browser
AA seq
1229 aa
AA seq
DB search
MRSMMFLSLLLCAICPFVLLSSAVPAPRTDETMLLNVTIPKSPPVSAILGASLTLQCLVS
LPPVSILGRSAGHTNPRIKWSKFSSGRETEILVARGERVKISEAYKGRASLPNYDSSPDD
LTLQLDSLRHNDTGVYRCEVQQGLEDAHDLAQIKVKGVVFHYRHASSRYAFSFDEAKNAC
EDIGARIATPEQLLAAYYSGYEQCDAGWLADGSVRYPIHTPREGCFGDMDGQPGVRNYGM
LETDELYDVYCYVENIRGKVFYGSTSKRFTLSEAKAYCEHQGAQLASTSQLYAAWNDGLD
HCSPGWLADGSVRYPIVNPRERCGGPEPGVKTVYRYSNQTGFPEPLSRYDAYCFMGELSS
QTVHPLDYLATEPEDIAQDIVTLPDKEEEFSSGHVTQKTENEAQGAVEIVSFSSKHKDKT
EQHDPTPSPFDKVYSTTTSRNIITTPSVYGQKPEPTQSSWQEVLMKPIDSELVPKIHLQP
SWNQPKSAEDQDKENTTADSEVKTDHHSVYQPMPDTILEPGEQVEYQTFTESKQSTTFDN
LEPLYEFTEIRGYKLMLETKHDDQNGSHVVEHSTVEAQASNVTLGQETDVSVDFRTPKSS
SEISEGSGSEMTTVLAGKFNTNLTLSQEDLYEHTSAETSTEISLLEDISHPTLSFQHSLE
QSVAPDTTSAINQVEQETGHTSAETPIVSLSSVDNDSESEFTATPVYLSENQTEPIDGSG
DDDNVLLLTRQTTQAPHLSDTSISPKSVDIRDSPVTESSTPSGISIMKEEVNTMTTTQLT
ETKTMSDKDHIGYEDNSSGTENSSGDGSSVTDLPYASASPIIPFNSTYLLLLNTTKDNNT
ENVSSTTHFAVEVTLIPDMTLTPIWDTVTSPTPPQEFRSDVEISGDPPVTTDDPDSSGES
DSTAVPITENPDETHSLTTSMATNVKEHGDQDLTATTESPNRKEEDELTTLTRHTSLPPR
PTDIVLDRTGISDGCLENPCANGGTCVDISTNVKCLCLPSYGGEFCQIDLEQCEPGWEKF
QGNCYKHFSKRQSWEVAEQHCRMSGGHLVSVMSSEEQSFINHRYREYQWTGLNDRTIEGD
FRWSDGNPLLYENWYRGQPDSYFLSGEDCVVMVWHDDGRWSDVPCNYHLSYTCKKGTTVC
GQPPLVLNAKQFGVRQSRYVINAQVRYHCEEGFLQRHNPIIRCQRNGQWEEPQITCTPQP
VDLNRKQDSLHSAKNDEATDKAKPKWLSF
NT seq
3690 nt
NT seq
+upstream
nt +downstream
nt
atgcgatcaatgatgttcctgtctctactgctgtgtgccatctgtccctttgtcctgctg
tcctctgctgtccctgcaccacgaacagatgaaacaatgctcttgaacgttacaatccct
aaaagccctcctgtgtctgccattctgggagcttccttaactctgcagtgccttgtgtca
ctgccaccagtgtccatcttgggccgctcggctgggcataccaatccacggataaagtgg
agcaaattttcctctggacgagagacagagattcttgtagcacgaggggagagggtgaaa
atcagtgaggcttataaaggtagggcctctcttccaaactacgactcttccccagatgat
ctcacactccagctggacagcctgagacacaatgatacaggagtctaccgctgtgaggtc
cagcagggattggaggatgctcatgatctggctcagatcaaagtaaaaggtgttgtgttt
cactaccgacatgcttccagccgctacgctttctcttttgatgaagccaagaatgcatgt
gaagacattggagctcggattgccacaccagagcagcttctggcagcatactacagtggc
tatgagcaatgtgatgccggttggttagcagatgggtctgtcagatatcctatccataca
ccacgtgagggctgttttggagatatggatggccagccaggggtccggaactatggcatg
ttggagactgatgagctttatgatgtttattgctacgttgagaacatccgtggaaaagtg
ttctatggatctacttcaaagcgattcacactgtctgaggctaaagcatattgtgagcat
cagggtgcacaattagccagcacaagccagctgtatgctgcatggaatgacggtcttgat
cactgtagcccaggttggctagctgatggcagtgtacgctatcctattgtaaacccacga
gagcggtgcggagggcctgaacctggagttaagacagtttatcgctacagcaatcagaca
ggctttcctgagcctctctctcgctacgatgcctactgcttcatgggagagcttagttct
cagacagtccacccattggattacctggccacagagccagaggacattgcccaggacatt
gtgactttacctgacaaagaggaagagttcagttcaggtcatgtgactcagaagacagaa
aacgaggcacaaggagctgttgagattgtctcattctccagcaaacacaaagataaaaca
gagcagcatgaccccacaccatccccatttgataaagtttattcaaccactactagcaga
aatattatcaccactccatcagtatacggacagaaacctgagccgactcagagctcttgg
caagaagtgctcatgaaacccattgactctgaactagttccaaagatacacctgcagccc
agctggaatcaaccaaagtcagcagaagaccaagataaagagaatacaacagccgattca
gaagtaaagactgatcatcattcagtctatcagccgatgccagacaccatcctggagcca
ggagagcaagtggaataccaaacatttacagaaagtaaacaaagcacaacatttgacaac
ttggagccactgtatgagtttacagagataagaggatataaattaatgcttgagaccaaa
catgatgatcaaaatggaagccatgtggttgaacattcaactgtagaagcacaagcaagt
aacgtcacattgggacaagaaacagatgtcagtgtggacttcagaactccaaagtcttct
tctgaaattagtgagggatcaggaagcgaaatgaccacagtacttgcagggaagtttaac
actaacctcaccctgagtcaagaagatttgtatgaacatacttcggctgaaactagcaca
gagatttctttgctggaagatataagtcaccctacactgagttttcagcacagtcttgag
caatcagttgcaccagacactactagtgctataaatcaagtggagcaagaaacagggcat
acttcagctgaaaccccaatagtgtctctcagttcagttgataatgacagtgagtcagaa
ttcactgcaacaccagtatatttatctgagaatcaaacagagcccattgatggttccggt
gatgatgacaatgtactattgctaactcgtcagaccacacaagctcctcacttgtcagat
acatccatttccccaaagtcagtggatatcagggactctcctgttacagagagcagtact
ccatctggcatcagcatcatgaaggaggaggtgaacaccatgacaacaactcagctgact
gaaaccaagacaatgtcagacaaagaccacattggctatgaagataactcatcaggaaca
gaaaactcttctggagatggatcttcagtcacagaccttccctatgccagtgccagtcca
atcatacccttcaactccacatacctgcttctcctgaacacaacaaaggataacaatact
gaaaatgtttccagcaccactcactttgcagtggaggttacactgatcccagacatgacc
ctaacaccaatctgggacactgtgacttctccaactccaccacaggagttccggtcagat
gtggagatcagcggtgatcctccagtaaccacagacgatcctgactcctcaggcgaatca
gactctactgcagttcccataactgagaaccctgatgagacacatagtctgaccacctcc
atggcaaccaatgtcaaggaacatggagatcaagacctgactgccacaacagaatctcca
aacagaaaggaagaggatgaactaacaaccctaactcgtcatacatcgttaccacccaga
ccaactgatattgtgctggacagaacaggcatatcagatggctgtctggagaatccatgt
gctaatggaggcacctgtgtagacatcagtactaatgtcaagtgcctgtgtctgccaagc
tatgggggagaattctgccaaattgatctggagcagtgtgagccaggctgggaaaagttc
cagggcaactgttataaacacttctcaaaacgtcagagctgggaggtggcagagcagcac
tgtcggatgagtggcggtcacctggtctctgttatgtcatctgaagagcaatcattcatc
aaccataggtacagggagtaccagtggactggtcttaatgacaggaccattgagggtgac
ttccgctggtctgatggaaacccgctgctatatgagaactggtatcgtggtcagcctgat
agttatttcctatcaggagaggactgtgtggtgatggtatggcatgatgatggccgctgg
agtgatgtgccttgtaactaccatctgtcctacacttgcaagaagggcaccactgtatgt
gggcagccacctcttgtattgaatgctaagcagtttggtgtacgacaaagtcgatatgtg
ataaatgctcaggtgcgttaccactgtgaagagggtttccttcagagacacaaccccatc
atcaggtgccaacgcaacggacagtgggaggagccacagatcacctgtacaccacaacca
gtggatttaaatagaaaacaagattctttgcactctgcaaagaacgacgaagccactgat
aaagcaaaaccaaaatggttgagcttttaa
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integrated database retrieval system
