Tachysurus fulvidraco (yellow catfish): 113644500
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Entry
113644500 CDS
T08119
Name
(RefSeq) cytotoxic and regulatory T-cell molecule
KO
K16361
cytotoxic and regulatory T-cell molecule
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
113644500
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tfd04515
]
113644500
04090 CD molecules [BR:
tfd04090
]
113644500
Cell adhesion molecules [BR:
tfd04515
]
Immunoglobulin superfamily
Nectin family
113644500
CD molecules [BR:
tfd04090
]
Proteins
113644500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
C2-set_2
ig
V-set
I-set
Ig_2
RIFIN
Ctr
Use1
Baculo_11_kDa
TRP
Conotoxin
DUF4834
LapA_dom
Izumo-Ig
FraC
DUF6377
SID-1_RNA_chan
Orf78
DUF6548
FAM176
Motif
Other DBs
NCBI-GeneID:
113644500
NCBI-ProteinID:
XP_027005213
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Position
20:complement(11343383..11348156)
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AA seq
426 aa
AA seq
DB search
MLNTQSFCIRILLLITVGLTQCLALKQISVVQGDTLTLTCPIKNTNMRDAVEWRNPDGFL
LFFNRHRVLKDKRKAFVTLTASKSSISLTGIKFKDAGVYKCLRYKKKVSTKRYKVIVIGV
PKLEMDQQEDKTLLKCSASANEHPPRLSWLMDNGLEIAAHPYYEFENASNKYTAVSQLTL
NVPKKRVTVKCLVRHSALHGSELETFIHLGDQSQDTTSSSTTLGSTDTTVIPTVFSNTSF
TYSHSASETTNYNNTTVNKSTEETSGRTNILSNTTDNETNKTISETTDGTPSNTSIESSS
NNTGNNHTQLNTRIERGNSPLLVLLVTCLIICLFVVLVFFLVRLRKAHIAWKKENEESDQ
SVESSRSKTSSEEKQKQQQRGQGFCNTNFTKYKAEEALEAQATPTSVVNENPQPFTSRSC
IKETEL
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgctgaacacacagagtttttgcattcgcattctcttgttgataactgtaggcttaaca
caatgtttggcactaaagcagatttcagtagtacaaggggatacactgacattgacatgt
cccatcaaaaacactaatatgagggatgctgtggagtggagaaacccagacggttttctc
ttattctttaacagacatagagtcttgaaagacaaaagaaaggcatttgtcactttaaca
gcctcaaagtcttcaataagtttgactggtatcaaattcaaggatgcaggtgtttacaaa
tgtctacgttacaagaagaaagtctcaacaaaaagatataaagtcattgttataggagtt
ccaaaactggaaatggatcagcaagaggataaaacattgcttaaatgctctgcttcagca
aatgagcatccacccagactctcatggctaatggacaacggcctagagattgctgctcac
ccatactatgagtttgaaaatgcatccaacaaatacacagctgtaagccagctgacctta
aatgttcctaagaagagagttacagtgaagtgcctggtccgtcactcagctctgcatggt
tctgaactggaaacctttatccacttaggagaccaaagtcaagatacaacctcatcgagt
accactcttggatcaacagacacaacggtcattccaacagtttttagcaatacaagtttc
acctatagtcattcagcatcagaaaccacaaattacaataatacaacagtaaataaatct
acagaagaaacttctgggagaacaaacatattaagcaacactactgataatgagacaaat
aaaacaatatctgaaacaacagatggtacaccgtcaaataccagcatcgagtcatcaagc
aacaatactgggaataaccacacacaattgaacacaagaattgaaaggggaaattctcca
ttgttggtgctgctggtcacatgcctcatcatatgcctgtttgtggtgcttgtcttcttc
ctggttcgcctcaggaaagcacacattgcctggaaaaaagagaatgaagaatctgatcag
tctgtagagagcagcagatctaagactagcagtgaggagaagcaaaaacagcaacagaga
ggacaaggcttttgtaacaccaatttcacaaagtacaaagcagaggaagcactagaggct
caggccacacctacttctgttgttaacgaaaacccgcagccctttacatctagatcttgc
atcaaagagactgaactgtga
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