Tachysurus fulvidraco (yellow catfish): 113644537
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Entry
113644537 CDS
T08119
Symbol
irx1a
Name
(RefSeq) iroquois-class homeodomain protein IRX-1a
KO
K24889
iroquois-class homeodomain protein IRX
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tfd03000
]
113644537 (irx1a)
Transcription factors [BR:
tfd03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
113644537 (irx1a)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
YL1
Motif
Other DBs
NCBI-GeneID:
113644537
NCBI-ProteinID:
XP_027005273
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Position
3:29676845..29686020
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AA seq
444 aa
AA seq
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MSFPQLGYPQYLYGVGAAADRQLLAPSSVSPASPPSAASSRGANCDVAGSACAVTSLLAA
GAGGAGGVYAHPYGYGAFLPYTSAAELALFSQMGSQYDLKDSPGVSFAAHASPAAFYPYA
GFQYGDASRPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANA
RRRLKKENKVTWGARPKSEDGEDGIIFGSDNEDKREDEEEIDLESIDIDKIDENDGDRSN
GEEEDDDDEDEDEEKRASKLLKERDDAHEHVHINNANANLNKNMPVMTSPGLQIPVSSKP
KIWSLAETATRPDVSKNATVQHPAFLGNHKLYTCPISKIHSWNNGAFRSHNSLLSVRSLV
GVNQNQLHQQHQHHQHQTQQQQQQQQQQQQQQQQQSVLEKDKSPEQLSPKHTERGVESPT
HTITKSSFRPLHDGPRNPHRVLTT
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttcccgcagctgggctacccgcagtacctttacggtgttggagcggcggctgac
cggcagcttctcgcgccgtcatcagtgtctcccgcgtctccaccttccgccgcgtcctcg
cgaggggccaactgcgacgtggcggggagcgcgtgcgccgtcacctcgctgctcgcggca
ggagccggcggcgccggtggcgtgtacgcgcacccgtacggctacggcgcgttcttgccg
tacaccagcgccgccgagctcgcgctcttctcccaaatgggttcacaatatgatctaaag
gacagccctggagtcagttttgcggcccacgcctcccctgctgcgttctacccctacgct
gggttccagtatggcgacgcatcaaggcccaagaacgccacgcgtgagagcaccagcact
ctgaaggcctggctgaacgagcaccggaagaacccgtatcccaccaagggcgagaagatt
atgctggccatcatcaccaagatgacgctcacgcaggtgtccacatggttcgccaacgcc
agacgaagactcaagaaggagaacaaagtgacatggggcgcgcggcccaagagcgaagac
ggcgaggatggcatcatcttcggcagcgacaacgaagacaagcgtgaggatgaggaggag
atcgacctggagagcatcgacatcgataagatcgatgagaacgatggggaccgaagcaac
ggcgaggaggaggacgacgatgacgaagacgaggacgaggaaaagcgagcaagcaaactc
ctgaaggagcgagacgatgcccatgagcacgtgcacatcaacaatgctaatgctaacctt
aacaaaaacatgcccgtcatgacatcaccggggctccagatccccgtcagcagcaaaccc
aagatctggtcactagcagaaacagcaacgagaccagatgtgtccaaaaacgccactgtc
caacacccggccttcctcggcaaccacaaactgtacacctgccccatcagcaagatccac
agctggaacaatggagctttccgcagccacaactcgctgctcagcgtccgctcgctggta
ggagtaaatcagaaccaacttcatcagcagcatcagcatcatcagcatcaaacacaacaa
caacaacaacaacaacaacaacaacaacaacaacaacagcaacaaagtgtactggagaag
gacaaaagccctgagcagctcagccccaaacacacagagcggggagtcgagtcgcccaca
cacaccatcacaaagtcctcgttcagacctcttcacgacggtcccaggaatcctcatcga
gtcctcaccacctga
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