Tachysurus fulvidraco (yellow catfish): 113644544
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Entry
113644544 CDS
T08119
Symbol
lrfn5b
Name
(RefSeq) leucine-rich repeat and fibronectin type-III domain-containing protein 5
KO
K16358
leucine-rich repeat and fibronectin type-III domain-containing protein 5
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
tfd04990
]
113644544 (lrfn5b)
Domain-containing proteins not elsewhere classified [BR:
tfd04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
113644544 (lrfn5b)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
Ig_3
I-set
LRR_4
ig
LRR_5
Ig_2
LRR_9
fn3
V-set
C2-set_2
DHU1_N
Sp38
Ig_5
Motif
Other DBs
NCBI-GeneID:
113644544
NCBI-ProteinID:
XP_027005277
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Position
16:complement(9624160..9637283)
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AA seq
789 aa
AA seq
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METIFVYLMVMIMAVKAQKIQICPKRCICQVLPPNLATLCDKKGLLFVPPDIDRHTVELR
LGDNFITTVKRKDFANMTKLVDLTLSRNTIGSITPHAFNDLENLRALHLDSNRLIRITND
TFSGMSKLHHLILNNNQLTYIHIGAFNDLLALEELDLSYNNLESAPWVAIQHMISLHTLS
LDHNMIDYIPEGTFSGLMKLKRLDVTSNKLQKLPPDPVFQRAGVLATSGVLGPSSFALSF
GGNPLRCNCELLWLRRLRREDDLETCAAPQHLSGRYFWTVSEEEFLCEPPLITRHSQETR
ALEGQHVTLRCKARGDPDPVIHWIAPDGRLVSNSTRTVVHTDGTLDILISTVKDSGSFTC
VASNPSGEAQQTVQLFIIKLPHFTNDTSLVQEPDPGSSDIATSTKSGGDSGTAISSTKAG
QEKRVLISEITSSSALVKFNLQRNIPGIRMFQIQYNGTYDDSLVYRMIPPTSKNILVNNL
AAGTSYDLCVLAIYDDAMTTLTATRVVGCVHFATEPQYLRCHFMQSQFLGGTIVVIIGGV
IVASVLSFIIFLIVRYRVCNQEGEDKGVELGEVCSQSRSEQLQVCGIIKSMSKQVLGVEM
DACRKVSPQLESVPTLGTTPGPLPSKPALPDCTVTTSAASHSWHPASPNTQRPMHAASHK
PTGPQKPDTQISVELDNTNKNNSAKARPKSAQIRVYSTTVIPVSKKVQLESSRYMTVPVG
CMRVSRRHSLNVDSCKQNSYGSFPQQTGSLRSKRSLSMSGGDLPQLDVSAKIHGKDSLSR
SEWVLESTL
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atggagaccatttttgtttatttgatggtcatgatcatggcagtaaaagcccagaagatc
caaatatgtcccaaacgttgtatttgccaagtgctgcctcccaacttagccaccttatgt
gacaaaaaggggctgctttttgttcccccagacattgacagacacacagtagaactgaga
cttggtgacaattttatcacaactgtcaaacggaaggactttgccaacatgaccaagctt
gtagacttgacactttccaggaacacaataggctctatcacacctcacgctttcaatgat
ctggagaatttgcgtgccctgcacttggacagtaaccgtctgatacgaatcacaaatgac
acctttagcggcatgtcaaagcttcatcatctcattctgaacaacaaccagctcacatat
attcacataggagcctttaacgacctcctggccctcgaagagcttgatctttcctacaat
aatctagaaagtgcaccatgggtggccatccagcacatgattagtctgcacaccttaagt
ctggaccacaacatgatagactatatacctgagggcacattttcaggcctcatgaaactc
aaacgtttggatgtcacttccaacaagcttcagaagcttccacctgatccagtcttccag
cgtgcaggtgttttggccacatcaggtgttttgggtccatcatcatttgcattgagcttt
ggggggaacccattacgctgcaactgtgagttgctatggctgaggagactacggcgtgag
gatgacctggagacttgcgctgctccacagcacctctctggacgttacttctggacagtg
tctgaagaggagttcctgtgtgagcctcccctcatcacacgtcattcccaggagacccgg
gcattagaaggccaacatgttactttgcgctgtaaagcacggggtgacccagaccctgtt
attcactggattgcccctgatggtagactagtgtctaactcaacccgaacagttgtgcac
actgatgggacactagatatcctcataagcacagtgaaagactctggatcgttcacatgt
gtggcatccaatccttcaggagaagcacagcagactgttcagctatttattatcaaactg
ccacattttactaatgatacaagcttagtacaggagccagaccctggatcctcagatatt
gctacatccaccaaatcaggtggagatagtggcactgccattagcagcaccaaagctggg
caggaaaaacgggtgctgatttctgaaattacatcctcctctgctctggtgaaatttaac
ttacaacggaatataccagggattcgtatgttccaaatccagtacaatggcacctatgat
gactcgctagtctacagaatgatccccccaaccagtaaaaacatcctggtgaacaacttg
gcagctgggacatcgtatgacctctgtgtgcttgcgatttacgatgacgctatgaccacg
ctgacggctacccgtgtggtggggtgtgttcactttgcaacagagccccagtacctccga
tgccacttcatgcaatcacagttccttggaggtaccattgttgtcatcattggaggtgtc
attgtggcctcagtcttgtctttcatcatcttccttattgtacgttatcgagtgtgcaac
caggagggagaggacaagggagtagagttaggagaagtttgttctcaatccaggagtgag
cagctgcaggtttgtggaatcatcaagtctatgtctaaacaggtcctgggtgtggagatg
gatgcatgtcggaaagtttccccacagctggagtcagtgcccacattgggaactacacct
gggccattgccctctaaacctgcccttcctgactgcaccgttactacctctgctgccagt
cacagctggcatcctgcctcccccaacacccagcgtcccatgcatgctgcctcacacaaa
cctacaggccctcaaaaaccagacacacaaatcagtgtggagcttgacaacaccaacaaa
aacaactcagccaaggcacgtccaaaatctgcccaaatacgggtctattccaccacagtg
attccagtgtccaaaaaggtacagctagagtcctcacgctacatgactgttccagtggga
tgtatgagagtgagtcgcagacactctttaaacgtagactcctgtaagcaaaacagctat
gggagtttcccacagcagactggcagccttcggtctaaacgcagtctgtccatgagtggt
ggagatcttccacagctggatgtttcagccaaaatccatggaaaagactcactgtcaagg
tcagaatgggttctagaaagcacactttaa
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