Tachysurus fulvidraco (yellow catfish): 113644562
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Entry
113644562 CDS
T08119
Symbol
itgb1a
Name
(RefSeq) integrin beta-1a isoform X1
KO
K05719
integrin beta 1
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd03271
Virion - Rotavirus
tfd04145
Phagosome
tfd04510
Focal adhesion
tfd04512
ECM-receptor interaction
tfd04514
Cell adhesion molecules
tfd04530
Tight junction
tfd04810
Regulation of actin cytoskeleton
tfd04820
Cytoskeleton in muscle cells
tfd05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03271 Virion - Rotavirus
113644562 (itgb1a)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
113644562 (itgb1a)
04514 Cell adhesion molecules
113644562 (itgb1a)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
113644562 (itgb1a)
09144 Cellular community - eukaryotes
04510 Focal adhesion
113644562 (itgb1a)
04530 Tight junction
113644562 (itgb1a)
09142 Cell motility
04820 Cytoskeleton in muscle cells
113644562 (itgb1a)
04810 Regulation of actin cytoskeleton
113644562 (itgb1a)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
113644562 (itgb1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tfd04131
]
113644562 (itgb1a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tfd04147
]
113644562 (itgb1a)
04515 Cell adhesion molecules [BR:
tfd04515
]
113644562 (itgb1a)
04090 CD molecules [BR:
tfd04090
]
113644562 (itgb1a)
Membrane trafficking [BR:
tfd04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
113644562 (itgb1a)
Exosome [BR:
tfd04147
]
Exosomal proteins
Proteins found in most exosomes
113644562 (itgb1a)
Cell adhesion molecules [BR:
tfd04515
]
Integrins
Integrin beta subunits
113644562 (itgb1a)
CD molecules [BR:
tfd04090
]
Proteins
113644562 (itgb1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_B_tail
Integrin_b_cyt
EGF_integrin
PSI_integrin
I-EGF_1
EGF_2
RBP_receptor
EGF_Teneurin
vWA_SIBA-E
Motif
Other DBs
NCBI-GeneID:
113644562
NCBI-ProteinID:
XP_047667424
LinkDB
All DBs
Position
3:9000853..9034417
Genome browser
AA seq
800 aa
AA seq
DB search
MDLKLLFISVLLGIICYSSAQPEGNECIKANAESCGDCIQVGAKCGWCTDTDFLKQGEPT
SARCDELESLKKRGCSVSLIENPQGSLKILKNKPVTHRKKGGEKLKPEDITQIQPQKLAV
SLRSGEPQTINLKFKRAEDYPIDLYYLMDLSYSMKDDLENVKNLGTSLMVEMSAITSDFR
IGFGSFVEKTVMPYISTTPAKLLNPCTGDQNCTSPFSYKNVLKLTSNGEQFNTLVGQQQI
SGNLDSPEGGFDAIMQVAVCGEHIGWRNVTRLLVFSTDAGFHFAGDGKLGGIVLPNDGKC
HLENNMYTMSHYYDYPSIAHLVQKLSENNIQTIFAVTEEFQPVYKELKNLIPKSAVGTLS
ANSSNVINLIIDAYNSLSSEVILENSKLPEGVTITYQSRCKNGVVSVGEEGRKCSNISIG
DEVSFSINITVNGCPKQGKPQILKIRPLGFTEEVEIKLSFICDCECQKKGIVNSDLCHNG
NGTFECGACRCNKDRIGRECECWKDEVSSEDLEKTCRRDNGTDLCSNNGECVCGKCECKK
RDNPEEYYSGEYCECDNFNCDRSNNKLCGGHGHCECRVCVCDANYTGSACDCSLDMSTCL
ASNNQICNGRGMCECGTCRCTDPKFQGPTCEICPTCPGVCTEHKACVQCRAFGTGEKKDT
CERDCSYFTLIKVKNTDNLPQPVQAFPLMHCKERDANDCWFYYTYSVTNHTEVHVVDTLE
CPAGPDIIPIVAGVVAGIVLIGLALLLIWKLLMIIHDRREFAKFEKEKINAKWDMQENPI
YKSPVNKFQNPNYGQKTAAL
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atggaccttaaactactttttatatcagtgttgttaggaatcatatgctacagtagcgcc
cagccagaggggaatgagtgcatcaaggctaatgctgaatcctgtggtgattgcatccaa
gtaggggccaagtgtgggtggtgcacagatacagacttcctgaagcagggagagcctacg
tcggcacgctgtgatgaacttgagtccttgaagaaaagaggctgttcagtgtccttgatt
gaaaaccctcaagggagcctgaaaatcctcaaaaacaaacctgtgacccaccgcaagaaa
ggaggcgagaaactcaaacccgaggacatcacccaaattcagccccagaaacttgcagtc
agcctaagatctggagagccacaaacaattaatctaaagtttaaaagggcagaggactat
cccattgacctgtactaccttatggacttgtcctattccatgaaagatgatctggaaaat
gtcaaaaacctgggcaccagcctgatggtggagatgtctgcaatcacgtcagacttcaga
attggttttggttcgtttgtcgagaagacagtcatgccctacatcagcaccacccctgcc
aagcttctgaacccctgcaccggggaccagaactgcacgagtcccttcagctacaagaac
gtgctgaaactcaccagtaatggtgagcagttcaacacactggtgggtcagcagcaaatc
tcaggcaatctggactctccagagggtggttttgatgctataatgcaagtcgctgtgtgc
ggggagcacattggctggagaaacgtcactcgtttgctggtgttttctacagatgcaggt
ttccattttgccggagatggaaaactgggtggaattgtgcttcctaatgatggcaaatgt
caccttgaaaacaacatgtacaccatgagccactattatgattacccatcaatagcacat
ctggtgcagaaactaagtgaaaataacatccagaccatctttgctgtaacagaggaattt
cagcctgtttataaagaattgaaaaacctcattccaaagtctgcagtgggaacattgtcg
gcaaactccagcaacgtgatcaaccttattatcgatgcgtacaattctctgtcttcagag
gtgattctagagaacagcaagctgcctgaaggagttaccatcacatatcaatcccggtgc
aagaatggagtagtaagtgttggagaggagggacgcaaatgctccaacatctcaattgga
gatgaggtctccttcagcataaacattacagttaatggctgccccaaacaaggcaaacct
cagatcctaaagatcagacctctgggcttcactgaggaagtggagatcaaactgagcttt
atctgtgactgtgagtgccagaagaaaggtattgtgaacagtgacctctgccataatggc
aacggcaccttcgaatgtggcgcctgcaggtgcaataaggatcgtattggccgagagtgt
gagtgctggaaagacgaagtgtccagcgaagacctggaaaagacctgccgtagagataac
ggtactgatctctgcagcaacaacggcgagtgtgtgtgtggcaaatgtgaatgtaagaag
agggacaacccagaggagtactacagcggcgagtactgcgagtgtgacaacttcaattgt
gaccgctcaaataacaagctctgtggaggccatggccactgtgaatgccgagtctgcgtt
tgtgatgctaactacacaggaagtgcatgcgactgctccttggatatgtcgacatgtttg
gcctccaataatcagatctgtaatggcagaggcatgtgtgaatgtggaacctgtaggtgc
actgatcctaaattccagggacccacatgtgagatctgccccacctgccctggagtctgc
actgaacacaaggcgtgtgtgcaatgccgagcttttggtacaggagaaaagaaggacact
tgtgaaagagactgcagctacttcactctgattaaagtgaaaaatacagataacctgcct
cagcctgtacaagccttcccactcatgcactgcaaggaaagagatgctaatgactgctgg
ttctactacacctactccgtcacgaaccacaccgaggtccatgtcgtcgatactttagaa
tgcccagctggtcctgatatcatccccatcgtggctggagtggttgcaggaattgtgctg
attggactagcccttctgttaatctggaaattgctcatgatcattcacgaccgccgcgag
tttgccaagtttgagaaagagaaaattaatgccaaatgggatatgcaagagaatccaatt
tacaagagtcctgttaataagttccagaatccaaactatggacaaaaaactgcagctctt
taa
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