Tachysurus fulvidraco (yellow catfish): 113644586
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Entry
113644586 CDS
T08119
Symbol
sntb1
Name
(RefSeq) beta-1-syntrophin isoform X1
KO
K24064
beta-syntrophin
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
113644586 (sntb1)
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Gene cluster
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Motif
Pfam:
Syntrophin_4th
PH_17
PDZ
PH
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
113644586
NCBI-ProteinID:
XP_027005368
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Position
3:complement(21271890..21294535)
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AA seq
529 aa
AA seq
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MAVASAVSGMRVQKSGFLEVLVRERWHRVLAELSDEALALSCEDAAGSGDVNGVTNGSGA
SSDRPETGARTPGADPCALDRVPEAIANRKRCVRVVKQDVGGLGISIKGGKENKMPILIS
KIFKGLAADQTHSLYVGDAILSVNGVNLRDATHDEAVQGLKRAGRVVTLEVKYMREATPY
VKKGSPVAEIGWETPPPESPRLGSPPCEVPPSPPSLSLHGDCRYIPLKMCYVTRAMTNPD
PENRLLELHSPDTKHTVVLRCSDTGSAQAWFDSMQTATNSIINKVMSELSEAARNGFEAS
HEIRHLGWLAEKMLHCWASAWMRQSTESDRQRWKPVVVVVTDKDLMLYDSMTRMKENWLN
PAHTYPLLSTRLVHSGPDRGSPQPGGELSFATRTGTRLGIETHVFRAETCKDLSMWTRHI
VAGCHTAAEMIKEVTTSCMYKGQDCRLVIHYELGFSVLPEGEPPHGHPLFSYPFEKLRMS
SDDGVRMLYLDFGGKEGEIQLDLHSCPKPIVFILHSFLSAKIARLGLLA
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atggcggtagcgtcggcggtttccggcatgcgtgtgcagaaaagtgggtttttggaagtg
ctggtgcgggaacgatggcatcgagtgctggctgaactgagtgacgaggcgctcgctctt
agctgcgaggacgcggccggaagcggcgacgtgaacggcgtgactaacgggtctggtgcg
agttctgacagacccgagaccggtgcgcggacacctggggcagatccgtgcgcgttggat
cgcgtacccgaagccattgccaacaggaagcggtgcgtaagggtcgtgaagcaggacgtg
ggcggcctgggcatcagcatcaaaggagggaaggagaacaagatgccgatactcatcagc
aagatctttaagggtctagccgcagatcagacgcactcgctttacgtaggagacgcgatc
ttgtcagtaaacggcgtgaacctgcgcgacgccacgcacgatgaggctgtgcagggctta
aaaagagctggccgggtggtcacactggaagtaaagtacatgagggaagctacaccatac
gtgaaaaagggttctccagtggctgagatcggatgggagacgcctccacctgaatctccc
cggctcggcagtcctccgtgcgaagttccccccagcccgccttcactgtcgctgcatgga
gactgcagatacatcccactcaaaatgtgctacgtcacacgggcaatgacgaaccctgac
cccgaaaacaggctcttggagctacactctcccgacacaaagcacacagtggtgctgcgg
tgttcagacaccggctcagcgcaagcctggtttgattcaatgcaaactgctaccaactcc
atcataaacaaggtgatgtctgagctcagtgaagcagccaggaacggattcgaggcgagt
cacgagatacgccacctcggctggctggcagaaaagatgctgcattgctgggcttctgca
tggatgaggcaatcgacagagagcgacaggcaacgttggaagccagtggtggtcgttgtg
accgacaaagatctgatgctgtatgacagcatgacgcgtatgaaggagaactggctgaac
ccagcacacacatatcctctactttctacacggttggtacactctggtccagatagaggg
tcgccccagccaggtggggaactatcctttgctacacgcacaggcacaagactgggcata
gaaactcacgttttccgagctgagacctgtaaagacctgtcaatgtggacgagacacatt
gtcgctggctgccacacagctgctgagatgattaaagaagtgactaccagctgcatgtat
aagggtcaggattgcaggctggtcattcactatgagttgggcttctctgttctgcctgaa
ggagagcctcctcatggtcatcctctattcagctacccctttgagaaactcagaatgtcc
tcagatgatggggttcggatgctctatttggattttggagggaaagagggtgaaattcaa
ctggacctgcactcgtgtcccaagcccattgtcttcattcttcactccttcctttcagcg
aagattgccagactgggcttactggcctaa
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