Tachysurus fulvidraco (yellow catfish): 113644797
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Entry
113644797 CDS
T08119
Symbol
thbs3a
Name
(RefSeq) thrombospondin-3a
KO
K04659
thrombospondin 2/3/4/5
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd04145
Phagocytosis
tfd04510
Focal adhesion
tfd04512
ECM-receptor interaction
tfd04518
Integrin signaling
tfd04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
113644797 (thbs3a)
04518 Integrin signaling
113644797 (thbs3a)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
113644797 (thbs3a)
09144 Cellular community - eukaryotes
04510 Focal adhesion
113644797 (thbs3a)
09142 Cell motility
04820 Cytoskeleton in muscle cells
113644797 (thbs3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tfd04131
]
113644797 (thbs3a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tfd04147
]
113644797 (thbs3a)
00536 Glycosaminoglycan binding proteins [BR:
tfd00536
]
113644797 (thbs3a)
Membrane trafficking [BR:
tfd04131
]
Endocytosis
Phagocytosis
Opsonins
113644797 (thbs3a)
Exosome [BR:
tfd04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
113644797 (thbs3a)
Exosomal proteins of colorectal cancer cells
113644797 (thbs3a)
Exosomal proteins of bladder cancer cells
113644797 (thbs3a)
Glycosaminoglycan binding proteins [BR:
tfd00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
113644797 (thbs3a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSP_C
TSP_3
COMP
EGF_CA
EGF_3
cEGF
EGF_LMN_ATRN
EGF
Motif
Other DBs
NCBI-GeneID:
113644797
NCBI-ProteinID:
XP_027005702
LinkDB
All DBs
Position
3:complement(20691015..20705204)
Genome browser
AA seq
962 aa
AA seq
DB search
MGAMRSVPVWIVLIMLQTSCLCEPLEKQDTQVIDMLALQDVKQNVAAVEKMSGALKSLSD
LYIVSTFRLPPKLGGVLLGFYNKQDNKKYLELAIMGKINKALVRYVREDGKLQTVNLQSS
NLADGRAQSIILRIGGLQRENLSLELYVNCRLADSAQRLPQLVTLPAEAELVEIRNGHKA
YARLQGSVESLKLALGGTVASAGALTDCPFQGDSSSYNIVNGEVNSILGDHTKALIGQLI
IFNQILGELRQDIREQVKEMSLIRNTIMECQMCGFHEPRSRCQPNPCFKGVPCMETFEFP
GYRCGPCPEGMTGNGTHCQDLNECSLAQPCYSTSACVNTVKGFRCEPCPAGYWGKPVLGV
GLEYAKNHKQECLDIDECVEVANACTANSVCINTIGSFKCGQCKAGYVGNQTAGCFPRKT
CSTLDFNPCHSRAHCIIERNGGVSCACNVGWAGNGNTCGVDTDIDGYPDRALPCMDNNKH
CKQDNCIYTPNSGQEDADNDGIGDQCDEDADGDGIKNVEDNCRLVPNKDQQNSDTDSFGD
ACDNCPNVPNIDQKDTDNNGEGDACDQDIDGDGVPNVLDNCPKVPNPMQTDRDHDGVGDA
CDSCPEMNNPMQTDIDNDLVGDVCDTNQDSDEDGHQDSRDNCPDIPNSSQLDSDNDGIGD
DCDDDDDNDGIPDTETAGGLGPDNCRLIPNPNQKDSDGNGVGDVCENDFDNDAVLDLIDV
CPESSEVTLTDFRAYQTVILDPEGDAQIDPNWVVLNQGMEIVQTMNSDPGLAVGYTAFNG
VDFEGTFHVNTVTDDDYAGFIFGYQDSSSFYVVMWKQTEQTYWQSVPFRAMAEPGLQLKA
VKSRTGPGEFLRNALWHTGDTQGEVKLLWKDPRNVGWKDKTSYRWQLSHRPQVGYIRVKL
YEGMDLVADSDVVVDTTMRGGRLGVFCFSQENIIWSNLRYRCNDTVPEDFESQHKQFMHI
HV
NT seq
2889 nt
NT seq
+upstream
nt +downstream
nt
atgggtgcaatgcgttctgtgccagtttggattgtgttgatcatgttgcagacctcctgc
ttatgtgaacctctggagaaacaagacacacaagtgatagacatgctggccctacaggat
gtcaagcagaatgtggctgcagtggaaaagatgtctggagctctaaagtctcttagtgat
ctctatatcgtctctaccttccgcctgccacccaaacttggtggagtgctacttggcttc
tacaataagcaggacaataaaaagtacctggagcttgccatcatgggcaaaatcaacaaa
gctcttgtgcgctatgttcgtgaggacggcaagctgcaaacagtaaacctgcaaagctct
aacttggcagacgggcgtgcgcaatccattatcctccgcataggaggcctgcaaagagaa
aacctcagccttgagctttatgtcaactgccgcctggctgactctgcacagcgcctgcct
caattggtcaccctgccggcagaggctgagttggtggagataagaaatggccacaaggca
tatgctcggcttcagggatcagtagagagcctcaaactagctctaggggggactgtagcc
agtgcaggtgctctcactgactgcccttttcagggtgactcctcttcatacaatatagta
aatggggaagtgaactctattcttggtgatcacaccaaagctctgattggacaactcatt
atctttaatcagatcttgggtgagcttcgacaagatatcagagaacaggtgaaggagatg
tctcttattaggaataccataatggagtgccaaatgtgcgggtttcatgaacctcgctcc
cgctgccagcccaacccctgctttaagggagttccctgcatggagacttttgagtttcca
ggatatcgctgtgggccctgtcctgaaggaatgacaggcaatggcactcactgtcaagat
cttaatgaatgttcattggctcagccctgctactctacaagtgcatgtgtaaacaccgtg
aagggcttcagatgtgagccctgcccagccggatattgggggaaacctgtcttaggggtt
ggtctagaatacgccaagaaccacaaacaggaatgtctggacatagacgaatgtgtggaa
gttgccaatgcatgcacagccaattctgtctgcataaacaccattgggtcatttaaatgt
gggcaatgcaaagctggctatgtgggaaatcagacggcaggctgttttcctcggaaaacc
tgttctacactcgactttaacccatgtcactcccgtgctcactgtatcattgagaggaat
ggtggagtgtcctgtgcgtgtaatgttggctgggctggtaacggcaacacctgtggtgta
gatacagatattgatggctaccctgaccgtgctctgccctgcatggacaataacaagcac
tgcaaacaggataactgtatatacacaccaaactcaggccaggaagatgctgataatgat
ggcataggtgaccagtgtgatgaagatgctgatggggatggcattaagaatgtggaggac
aactgccggctggtacccaataaagaccaacaaaactcagacacagactcctttggcgat
gcatgtgacaactgtcccaatgtgcccaacattgaccagaaagacacagacaacaacgga
gagggcgatgcttgtgaccaagatattgatggagacggtgttccgaatgtgctggataac
tgtcccaaagtgccgaaccctatgcagacagaccgggatcatgatggagtgggagatgcc
tgtgacagttgccctgagatgaacaaccctatgcagactgacatagacaatgaccttgta
ggagatgtgtgtgacacaaatcaggactctgatgaagatggacaccaagatagtcgagac
aactgccctgacatccctaacagctctcagcttgattcggataacgatggtattggagat
gactgtgatgatgatgatgacaatgatggaattcctgacactgagactgcaggaggtctc
ggtcctgataactgcagactcattcccaatcccaaccagaaagactccgatggcaatggt
gttggagacgtgtgtgagaatgactttgacaatgatgcagtactggatttgattgatgtg
tgtccagagagttctgaggtcacacttacagacttcagagcctatcagactgtcatattg
gacccagagggtgatgcccaaattgatcctaactgggtggtccttaatcagggtatggag
attgttcagacgatgaacagtgaccctggattagcagttggctatacagcattcaacggt
gtggactttgagggcactttccatgtaaacacagtgactgatgatgactatgctggcttc
atctttggctatcaggactcatctagcttctatgtagtgatgtggaagcagacagagcag
acatactggcagtctgtgccatttcgagccatggctgagcctggcctacaactcaaggca
gtaaagtcccgtacagggcctggtgaatttctccgtaacgctttgtggcacactggagac
acacaaggtgaggtgaagttattgtggaaagacccacgcaacgtcggctggaaagacaaa
acctcctatcgctggcagctcagtcaccggccccaggttggctacatcagagtaaaactc
tacgagggaatggatttggtggctgactccgatgtagtggttgacacaactatgagagga
ggtcggcttggagtattctgcttttcacaagagaatatcatttggtctaacctacgctac
cgatgcaatgacacagtcccggaggactttgaatcacagcataaacaattcatgcacatt
catgtgtga
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