Tachysurus fulvidraco (yellow catfish): 113644816
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Entry
113644816 CDS
T08119
Symbol
lama1
Name
(RefSeq) laminin subunit alpha-1 isoform X1
KO
K05637
laminin, alpha 1/2
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd04510
Focal adhesion
tfd04512
ECM-receptor interaction
tfd04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
113644816 (lama1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
113644816 (lama1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
113644816 (lama1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_1
Laminin_G_2
Laminin_EGF
Laminin_B
Laminin_N
Laminin_I
Laminin_II
Laminin_G_3
TS_C
Alpha_adaptinC2
Motif
Other DBs
NCBI-GeneID:
113644816
NCBI-ProteinID:
XP_027005733
LinkDB
All DBs
Position
3:11443479..11483036
Genome browser
AA seq
3090 aa
AA seq
DB search
MRFILALVLLCASSVYCQQRGLFPAILNLASNAEISTNATCGDPVPEMYCKLVEHVPGRR
IRNPQCRICDANGTNSKEQHPITYAIDGTNQWWQSPSIKNGRQFHWVTITLDLRQVFQVA
YIIIKAANSPRPGNWILERSLDGVQYHPWQYYAISDTECLTRYNVTPRLGPPTYKRDNEV
ICTSYYSRLVPLEHGEIHTSLINGRPGADDLTPELLGFTSARFIRLRLQRIRTLNADLMT
LSYKDPKDVDPIVTRRYYYSIKDISVGGMCICYGHAQSCPLDPVTKKLQCMCEHNTCGES
CNECCPGYHQELWQPGTISEGNTCEKCNCHDKAEDCYYNQTVADLKMSMNSHGQFVGGGV
CINCTQNTAGVNCETCADGYYRPHKVSPYADQPCVECNCDMRGSLSRVCVKDDNQASPGK
GVFPGQCVCKEGFAGEKCDRCAFGYRDFPSCTRCECSLEGSLNIDPCRECICKVNVMGAN
CDLCKQGFYNLQASNPEGCTECFCFGVSDVCESSTWSTSMIVHRDGWLRPSTRSTSVFTA
PIIEDNLIIANNATAARSYQTVSAWAAPEPFIGNKLTAYGNLLNFSVAYDVSVDNNVDKT
LPSHFDVIIEGNGKTLRQLLPRRVFLNPHRDQQVALELLPHVFMDVHTERRVQRDELMSV
LADVASLRIRAHLNTTVDGVLRLSTVYMVVADPTSTSSNISPDVEQCECPWGYSGTSCET
CISGFYRVGGILFGGNCLQCECNDHASECDINGVCLDCSHNTTGPHCNQCLPGYYGDPTE
GTEEDCQRCACPLTLASNNFSPTCSLRGPGEVTCDQCERGYTGAKCERCANGFYGNPTIP
GQKCSVCECNGNVDPSEPGYCDAITGECLKCVRHTAGRHCERCEDGYYGDAIIAKNCRAC
GCHANSSVSTLCNIITGQCECKANVEGDNCDRCQVGFFGINSGDGCRECKCNQSGSVSEA
CDEAGRCQCTIGVAGDKCDRCLHGYYNFTDDGCTPCNCDHTHGNCNAETGECICPPNTRG
EKCEICDDDHWGHDGVTGCKSCGCDAAGSNSSQCDLLSGQCVCRPHFTSQKCDRCTLGFR
NFPECTACNCNADGTHEEFCDAELGVCGCEDDGRCVCKENVGGGGCDECKSGTFGLWRQN
PAGCSPCFCFGVSSICEELGGLVRVPITAGLTTERLHVVSQSDLQGTLEGVYYIAGEILL
DVAQLQTGSTLTGPYYWRLPQPFLSSKLLSYGGELSYTVTFAAMDGSGLSNYEPQVLMRG
GHLRKLVIYTDMPAPENGVRTTQRVPLTEHKWKYFNAVSENAVSHEDFMSILSNVEYIII
KASFGTGLQQSRISNISMETAVDVDESPEGMEVARLVEICECPPGYAGLSCQECAPGYYR
QRVSELNMKGKNRPMIQPCVPCQCNNHSLACDLDTGECLGCQHHTAGEHCNICAPGYYGQ
VKGSISDCSLCACPIQSNSFSPTCVLDGVGDYHCNACKPGYEGRYCERCSLGYYGNPSQP
GGKCEECVCGTSGSLHNLCDGQTGRCECKLGFRGHLCDQCEDRHVLTDDQCVSCDDECTG
LLLDDVDAIEASIQSLNLSGVILAPYTLLISLENQTHELRTKMSSELNSSYRLNGREEDA
THLTKQVDQLQQKAMNISTFSHNVLRATEESVNHGKGLLDLISNLHTAIQVVKEDVSNLN
ETVKEEMEEGRSAVLLEQMEAILENIRAVDLVSSNSTAVEERSASVVVLDSVQKEIMEPS
NQTENLKHNISTNLARHHQHLQYAQELLNTAKNHTNHTEHLLMNIHTNLEEYKITRHNVS
SLNQSVEANLEEAQDFLTDALHIAEDMRNLTAKVEEAKDELLQWSPTVRKHVDTLVMELT
KRDALQLVYSAEDHAQALRTEAQTINSTLSGVREASLNATTTSRGISDISDNIHQAENVA
LSVNQNASYTLNLSQHSNESLTELGKQAVQRSLKILNESADLNTYIEGLVLNTSAVTSKL
SVITTSVHNFSQLLPEALINLNNLPSGNREQILEAKQQAANANASLQKALEHLEDYRIKL
EASSSAVSSANSSAVTVNMMVKDSEDTASAVESKIKEAQTRTERLFDRLQPLKMLRENLS
RNLSEIKEMINQARKQAASIKVAVSADMNCVRSYKPEITSSNFNTLTLTVKTTEPDNLLF
YMGSNSSVDFMALEMRHGKVAFLWDSGSGLTKLEFPNLQINNNKWHRINATRFGRQGSLS
VQQLDSEPMPPVKTTAPGSSTLMEVNKSTWVFVGGLGGQVKKSSAVKMTHFTGCIGEASL
NEKNIGLWNYAEREGSCGGCFMRPQTEETSFHFDGSGYSVVVKNLRPTSTSIVMFFKTLS
PNGLLLYLASNGTRDFLSIELVEGKVHMTFELGSGPLTLTSTKVYNTGVWYKIALNRNKR
KGYLSIMTADTPSEREIMEAESPGTASDLNRSDLDPIYIGGLPASRPIRRQVVARSYVGC
IKNVEIARTNFDLLREAFSVKKGCILKPIRSVSVLGGGYVQMPEVTVGPHSELMSSFSSR
NSSGLILAGFSSASGHKRRHTQQPFLAVMLVSGRVEVHISMVEGGGMYKAVVKSQNGTFS
DGQEHSLILQRNKRTLTVYVDEDQQETVRLGLPSEKILTLSNFYIGGVPPGEVTGTLVST
ASFYGCIRNMAVDTMLLDLSGAIKYEGVDMDSCLLEERPKRLLLPDEGDVEPEPTAGPDQ
RPLSPPSEHSAVTPGATTCAASDNTESIPDVHQLGFSKNSYMMFSFKNKTVRSSFTVELS
IRTLAHSGILYYMANANQQDYAVLQLLGGRLLFSCDLGKGPAMTTSLTNINDGQWHNVRT
DFSKKSILISVDGAESERTTIKGQSLDVEGKLYVGGLPAGYTAKRIGNVTHSVASCVQKV
KLNNAELNLNNAAASYDTGSCFSVVQDGTFFNGSGYAAFMKEGYYVGSDVTVSLEFRSTS
LDGVLLGVSSARVDAIGLELIDGQVVFNVNNGAGRFSAVSRSRSWLCDGRWHTLVAKKLK
HSLSLTVDGVTVSAENPHSSSTSAETKNPIYIGGYPANVKQSCLSTRTSFRGCMRNLRLS
RGHIIDVLEFSSAFTRPGVSPHSCPAAAAA
NT seq
9273 nt
NT seq
+upstream
nt +downstream
nt
atgaggttcatcctggcgctcgtgctcctctgtgcatcctcagtatactgccagcaaaga
ggtctctttcctgccattctgaacttggccagcaatgctgaaatatccaccaatgccaca
tgtggggaccctgttcccgagatgtactgtaagctagtggagcatgtgcctggaagacgc
atacgaaacccccagtgcaggatatgtgatgctaacggcacaaactctaaagaacaacac
cctatcacttatgctattgatggcaccaatcagtggtggcagagtcccagcatcaagaat
ggccgtcagttccactgggtcaccatcacgctggatttacgacaggtcttccaggttgct
tacatcatcatcaaggcagcaaattctcctcggccagggaactggattctggagaggtct
ctggatggtgtccagtaccatccatggcagtattatgccatcagtgatacggagtgtcta
actcgttataatgtcaccccgcgtcttgggcctcctacctacaagagagataatgaggtc
atctgtacctcctactactcccgactggtgcctctggaacatggagagatccacacgtct
ctgataaacgggcgtccaggcgctgacgacctgacacctgagctactggggttcacctct
gcccgatttattcgtctgcgtctgcaacgaatccgcacactcaacgccgatctcatgaca
ctaagctataaggaccccaaggacgtggaccccatcgtcacccgccggtattactactca
atcaaggacatttcagtgggtgggatgtgtatctgctatggccacgcccagagctgtccc
ttggaccctgttaccaagaaactgcagtgtatgtgtgagcacaacacttgtggcgagagc
tgtaatgagtgttgtcccggctaccaccaggaactgtggcaaccagggaccatctctgaa
ggcaacacatgcgagaaatgcaactgtcacgacaaagcagaggactgttattacaaccag
acggtggccgatctgaagatgagcatgaactcacacggccagtttgtaggaggcggtgtg
tgtatcaactgcacgcaaaacactgcaggagttaactgtgaaacttgcgctgatggttac
tacagaccacacaaggtgtctccatatgctgaccagccttgcgtggagtgtaactgcgac
atgcggggctcgctcagccgtgtctgcgttaaagacgacaaccaggcaagtcctggaaaa
ggtgtttttccgggtcagtgtgtgtgtaaagaagggtttgcaggggagaagtgcgatcgc
tgtgcgttcgggtacagagacttcccctcgtgcacaaggtgcgagtgcagccttgaagga
agccttaacatcgacccctgtagagagtgtatctgtaaggtcaatgtgatgggggcaaat
tgtgacctgtgtaagcagggcttctacaacctacaggccagtaacccagagggatgcact
gaatgtttctgtttcggtgtctctgatgtgtgtgaaagctctacctggtccacatccatg
attgtacacagagatggttggctccgtccttcaactcgtagcacctcagtcttcacagcc
cctatcatagaggacaaccttatcatcgctaataatgctaccgctgctaggagctatcag
actgtatctgcctgggctgccccagaacccttcatcggcaacaagctgactgcatatgga
aaccttctgaacttcagcgtggcatatgatgtatcagttgacaataatgtggacaaaact
cttccatcacattttgatgtgattatcgagggaaatgggaagacgctgcgccagcttctc
cccaggcgtgtatttctgaatcctcacagagatcagcaggtggccctggaactcctgcct
catgttttcatggatgtacacacagagagaagggtgcagagagacgagctgatgagcgta
cttgctgacgtggccagtctcaggatcagagctcacctcaacaccactgtggatggagtg
ttaagattgagcactgtgtacatggtcgtagctgatcccacttccacaagctctaatata
tctccagacgtggagcagtgtgagtgtccttggggatactccgggacatcctgtgagacc
tgcatttctggcttttatcgagttggaggcatccttttcggaggcaactgtctgcagtgt
gaatgtaatgatcatgcctctgagtgtgatattaatggggtgtgtctggactgctctcac
aacactacaggaccacactgtaaccagtgcctgccaggttactatggtgacccaacggaa
ggcaccgaggaagactgtcaacgatgtgcctgcccactgacactggcgtccaacaacttt
agtcctacttgttctctgcgaggtcctggagaggtcacatgtgaccagtgtgagcgagga
tacacaggagccaagtgtgagaggtgtgctaacggattttatggcaacccgaccatccct
ggtcagaaatgctcagtgtgtgagtgtaacgggaacgtggacccgtctgaaccaggctac
tgtgacgctattactggcgaatgtttaaagtgtgtgagacacacagcaggcagacactgt
gaacgctgcgaggatggttactatggtgatgctattatagctaagaactgccgagcctgt
ggctgccatgctaacagctcagtttccactttgtgtaacattataacgggtcagtgtgag
tgtaaagccaacgtggagggagacaactgtgaccgctgtcaggtcggtttcttcggtatc
aacagtggcgatggttgcagggagtgcaaatgtaatcagtcaggatcagtatcagaagca
tgtgatgaagctggtcggtgccagtgtactattggtgtagctggtgataaatgtgaccgc
tgcctgcacggctactacaatttcacagacgacggctgcacaccttgcaactgtgatcac
acacatggtaactgcaatgctgagacaggcgagtgtatctgcccaccaaacaccagagga
gagaaatgtgaaatatgtgacgacgatcactggggtcatgatggagtgactggatgcaag
tcatgtggatgcgatgccgccggctcaaactcgtctcagtgtgacctgctcagcggtcag
tgcgtgtgtaggccacacttcacttctcagaaatgtgaccgttgcactctaggctttagg
aatttcccagagtgcactgcatgcaactgcaacgctgacggcacccatgaggagttttgt
gatgcagaactgggagtgtgtggatgtgaagacgacggacggtgtgtgtgcaaggagaat
gtaggtggtggtggttgtgatgaatgtaaaagtgggacatttggtctgtggaggcagaat
ccagctggatgcagcccctgcttctgttttggggtctcctccatctgtgaggagcttggt
gggctggtcagagtgccaataacagcagggcttacgactgagcgtctacacgtagtgagc
caaagtgacctgcaaggaacactagagggagtttattacatagcgggagaaattctgctg
gatgtggctcagctccagactggttcaactctcactggaccttattactggcgattgccc
caaccttttctgagcagcaagctgctgtcctatggtggtgaactctcatatactgtaacc
tttgctgcaatggatggatcaggtctatctaattatgagcctcaagtgctgatgagggga
ggacacctgaggaagctggtgatttacaccgacatgcctgctccagagaatggtgtccgc
accacacaacgtgtccctctcacagagcacaagtggaagtacttcaatgcagtgtctgag
aatgctgtgagtcacgaagacttcatgtccatcttgagtaatgtggagtacatcatcatc
aaagcctcattcgggacaggactccagcaaagcaggatctcaaatatctccatggagaca
gcggtggatgtggatgaatctcctgagggaatggaggtggccaggctggtagagatatgt
gaatgccctccaggctatgcaggcctgtcctgtcaggaatgtgctccaggttactatagg
cagcgagtatcggagctcaacatgaagggcaagaatagacctatgatccagccttgtgtc
ccctgccagtgtaataaccacagcttggcatgtgacctagacactggcgagtgcctgggc
tgtcagcaccacacagcaggagaacactgtaatatatgtgccccggggtattatggccag
gtgaagggctccatcagtgactgctcactttgtgcttgtccaatacaaagcaacagtttt
agccccacatgtgtattggatggtgttggtgattaccactgtaatgcctgtaaaccaggc
tatgaaggacgctactgtgagaggtgttcactgggttactatggtaacccctcacaaccc
ggtgggaagtgtgaggagtgtgtgtgcggcacgagcggctcactgcacaacctttgtgac
ggacaaacggggaggtgcgagtgcaaacttgggttcaggggtcatctatgtgaccagtgt
gaggaccgacatgtcctcactgatgatcagtgtgtgtcatgcgatgatgaatgcactggg
ctgctgctggatgatgtagatgctatagaagcctcaatacagtctctgaacctcagtggt
gtcattctggctccatacaccctgttgatcagcctggagaaccagacccatgagcttcgg
accaagatgtcatcagagctgaactcaagctatcggttgaacgggagagaggaagatgca
acacatctcactaaacaagtggatcagctacaacaaaaggctatgaacatatccactttt
agccacaatgttttgcgggctactgaagagagcgttaatcacggaaaaggtcttcttgac
ctgatttctaaccttcatactgccatccaagttgtgaaggaggatgtgagcaatcttaat
gagacggtgaaagaggagatggaggaaggacgcagtgctgttctgctggagcagatggag
gccattttggagaatattagggctgtcgacttggtcagcagcaacagcactgctgtagaa
gaacgcagtgcttcagtggtggtacttgacagcgtgcaaaaggaaataatggaaccttcc
aatcaaacggagaatctgaagcacaacatctccactaacttagctaggcatcaccagcac
ctccagtatgcacaggagctcctgaacacagccaagaatcacactaatcacacagaacat
cttctgatgaatatccacaccaatctggaagagtacaagataacaaggcataacgtgagc
agtctgaatcagtctgtggaggcaaatttggaggaagctcaggattttttgactgatgca
cttcatatcgccgaagacatgcgcaatctcacagcgaaggtggaggaggctaaggatgag
ttgctgcagtggagccccactgtgaggaaacatgtggacactctagtgatggagctaacc
aaaagagatgctctacagttagtgtacagtgcagaggaccatgcccaagcactcaggaca
gaggcacagacaatcaacagtactttgtctggagttagagaagcatcgctgaatgccacc
accacttcccgaggaatctctgacatcagcgacaacatccatcaggcggaaaacgtggca
ctgtccgtcaatcagaatgctagttacacccttaacctgagtcaacattcaaacgaatcc
ttaactgaactggggaaacaggctgtgcagagaagcttaaagattttaaatgaaagtgca
gatttgaatacatacattgaagggcttgtgctgaacaccagtgctgtaactagcaagctc
agtgtaatcacaacgagtgtgcacaacttctcccagctgctccctgaggctctcatcaac
ctgaacaacctgcccagtggaaatagggagcagattcttgaggcaaagcagcaagcagcc
aatgccaatgcctcattacagaaagctctagagcatttggaggactaccgcataaagcta
gaggcatcatcttcagctgtgagctcagccaacagcagcgccgtcactgttaatatgatg
gttaaagactctgaggacactgccagtgcagttgaatctaagataaaagaggctcagaca
cggacagagagactctttgacaggttacaaccgctgaagatgctgcgggagaacttgagc
aggaacctgtcagagataaaggagatgatcaatcaggcccgaaagcaagcagcctcgatc
aaagttgcagtgtcagcagatatgaactgtgtgcgttcatacaaaccagaaatcacctcc
agcaatttcaacacactcacccttactgtgaaaacgacagaaccagacaacctgctcttc
tacatgggtagcaactcaagtgtggatttcatggctcttgagatgaggcatggaaaagtg
gcctttctgtgggattcaggctcaggcctcactaaactggagttccctaacctgcagata
aacaacaacaaatggcacagaattaatgccactcgattcggaaggcaaggctccctcagc
gttcagcagttggactcagagccgatgcccccagtcaagacaacagcgccaggttcatcc
acactcatggaagtcaacaaatccacatgggtgtttgtgggagggctgggtggacaggtt
aagaaatcttcagcagtgaagatgactcactttacaggatgtattggtgaagcatctctg
aatgagaagaacatcgggctctggaattacgctgaaagggaagggagctgcggtggttgc
tttatgaggccgcagacagaggagacctctttccactttgatggcagtggatattcggtg
gtagtgaagaatctgcgtcccacatccacaagcatcgttatgttcttcaaaactctttct
cctaacggcctgctgctctacctggcttccaacggcactagagacttcttgtccattgaa
ttggtagaaggtaaagtgcacatgacctttgaactgggctctggacctctcacattgacc
tccacaaaagtgtacaatacaggagtatggtacaagattgccctgaatcgcaacaaacgc
aaaggctatttatccataatgaccgcagacaccccatcagagagagagatcatggaggca
gagtctcctggaactgcctctgacctcaaccgatcagatctggaccctatatacattggt
gggctgcctgcatccaggccaatcaggaggcaggttgttgcacgctcatacgtgggctgt
atcaagaatgttgaaatagcacgcacaaactttgacctcctgagagaagccttcagcgta
aagaaaggctgcattctaaagcctatccgcagcgtgtctgtgctgggtgggggatatgtg
cagatgcctgaagtcaccgttggtcctcatagcgaactcatgagcagcttctccagcaga
aacagcagtggtcttatcctggcaggcttcagctcagccagtggccacaaacgcagacac
acacagcagccgttcctggctgtgatgctggtgtcaggcagagtagaagtccacatcagc
atggtggagggaggaggaatgtacaaagctgttgtcaaatcccaaaatggcacattcagt
gatggacaggagcactccctcatcctgcagaggaacaaaaggacattgacagtgtatgtt
gacgaggaccagcaggaaacagtaaggctgggtttaccttcagagaaaattcttactctg
agtaatttctacatcggaggcgttcctccaggagaggtcactggaacgctcgtctccacc
gcatcgttctatggctgcatcaggaacatggctgtggacaccatgctgttggacctgtca
ggagcaataaagtatgagggagtagacatggacagctgcctgctggaggagcgtcctaaa
cgcctgcttctgccagacgagggagacgtggagcctgagcccactgctggcccggaccaa
agacccctgtcacctcccagtgaacacagtgctgttacaccaggagccaccacttgcgct
gccagcgacaacacagaaagtatcccagatgtacatcagcttggattctccaaaaacagt
tacatgatgttcagcttcaagaataaaacagtcaggtcgagttttacagttgagctgtcg
atccgtacgctggctcacagcgggatcctgtactacatggctaatgctaatcagcaggat
tacgcagtgctgcagctgctgggaggtcggctgctgttctcttgtgacctgggcaaagga
cctgccatgaccacttcactcacaaacatcaacgatggacagtggcacaatgtgaggacc
gacttcagcaagaaaagcatactgatcagcgtcgatggagccgagtcggagcgaacaacc
attaaaggccagagtctggatgtagaagggaagctctatgtgggtggattgccagcagga
tatacagccaagaggatcggaaacgtgacccacagtgtagccagctgtgtgcagaaggtc
aagttgaacaacgctgaactgaacttgaacaacgcagctgcatcttatgataccggctcg
tgcttcagcgtggtgcaggacggcaccttcttcaacggctcgggatacgccgctttcatg
aaagagggttattacgtgggctctgatgtgaccgtgagtttggagttccgttccacgtca
ctggatggggttctgctgggagtgagcagtgccagagtggacgccatcggactggagctc
atcgatggacaggtggtgttcaatgtgaataacggtgctggaagattctcagctgtgtcc
agaagcaggtcatggctttgtgacggccgctggcacactctggtggccaagaagttaaag
cacagcctgagtctgaccgtcgacggcgtgaccgtgagcgcagagaacccacactcttcc
tctacctcagccgagacgaagaaccctatctacattggaggatatccagctaacgtgaag
cagagctgtctgagcaccagaacatctttccggggctgcatgaggaaccttcgcctctcc
agaggtcatattatagacgtgttagagttcagctcggccttcactcggcctggcgtctct
cctcactcctgtcctgctgctgctgctgcctga
DBGET
integrated database retrieval system
