Tachysurus fulvidraco (yellow catfish): 113644924
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Entry
113644924 CDS
T08119
Symbol
vps36
Name
(RefSeq) vacuolar protein-sorting-associated protein 36 isoform X1
KO
K12190
ESCRT-II complex subunit VPS36
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
113644924 (vps36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tfd04131
]
113644924 (vps36)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tfd04147
]
113644924 (vps36)
Membrane trafficking [BR:
tfd04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
113644924 (vps36)
Exosome [BR:
tfd04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
113644924 (vps36)
Exosomal proteins of colorectal cancer cells
113644924 (vps36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
Xre-like-HTH
TssO
Flu_M1_C
GRAM
Laminin_II
BBL5
Motif
Other DBs
NCBI-GeneID:
113644924
NCBI-ProteinID:
XP_027005878
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All DBs
Position
20:12553553..12561691
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AA seq
381 aa
AA seq
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MDRFMWTNGLLEMNETLVIQQRGVRLYDGDDKVKLDVGVVLLSTHRLIWRDQKNHECCIC
IPLSQIIFFEEQAAGIGKSAKIAIHLHQSPANKEPGPYQHSKFSYIKLSFKEHGQIEFYR
RLTEEMTQRRWENTPVSQPISPAGLQAGRTRAVGIVGIERKLEEKRKEMDKNISEAFEDL
SKLMEKAKEMVELSRSIANKIKDKQGDITEDETIRFKSYLLSMGIANPVTRETHGSGTHY
HMQLAKQLGDMLQAPLEERGGMMALTEVYCLVNRARGMELLSPEDMVNACKLFESLKLPL
RLRVFDSGVMVVQLQSHSEEEMIASAIDNVSDKGSLTAEEFAKLLGLSVLLAKERLLLAE
KMGHLCRDDSVEGLRFYPNLF
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atggatcgattcatgtggaccaatggacttctcgaaatgaacgaaaccttagtaatccag
cagaggggtgttagactgtatgacggagacgacaaggtgaaactcgacgtaggagtcgtc
ctcttaagcacacaccgattaatttggagggatcaaaagaatcatgagtgctgtatatgt
ataccgttgtctcagatcatattttttgaggagcaggctgcaggaattggaaagagtgcc
aaaattgccattcacctacatcaatctcctgctaataaagaacctgggccataccagcac
agcaaattctcctacattaaattatcctttaaagaacatgggcaaattgagttttacaga
cgtctgacagaggaaatgactcagaggaggtgggaaaatacgccagtgtcacagccaatt
agtccagcaggactgcaggcaggaagaacacgtgcagtaggtattgttggtattgagcgg
aagctggaggagaaaaggaaagagatggacaaaaacatttcagaggcttttgaagatctc
agcaagcttatggagaaggctaaagagatggttgagctttccagatccattgccaacaaa
atcaaagacaaacagggggacattactgaggatgagactattcgcttcaagtcgtatttg
ttgagcatgggtatcgccaaccctgtaaccagggaaacacatggctcaggcacacactac
cacatgcaacttgctaaacagctgggagacatgctgcaggcaccactggaggagcgaggg
ggaatgatggctctcacagaggtctactgcttagtaaaccgagcacgagggatggagctt
ctttctcctgaggacatggtcaatgcctgcaagttgtttgagtctctgaaactccctctc
aggttgcgagtgtttgacagtggtgtaatggtggttcagctgcaatctcacagtgaagaa
gagatgattgcatctgccatcgataatgtgtctgataaaggctccttgacagcagaggag
tttgctaaacttttagggctgtctgttcttctggcaaaagagagattgctattggctgag
aaaatggggcatctgtgcagagacgactccgtggaaggcttacgattttatcccaacttg
ttctaa
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