Tachysurus fulvidraco (yellow catfish): 113644949
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Entry
113644949 CDS
T08119
Symbol
lingo2b
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 2b
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tfd04131
]
113644949 (lingo2b)
Membrane trafficking [BR:
tfd04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
113644949 (lingo2b)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
I-set
LRR_4
Ig_3
ig
Ig_2
LRR_RPS2
V-set
LRR_9
Ig_6
LRRNT
LRR_R13L1-DRL21
C2-set_2
Ig_C17orf99
Motif
Other DBs
NCBI-GeneID:
113644949
NCBI-ProteinID:
XP_027005910
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All DBs
Position
4:11794577..11809246
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AA seq
607 aa
AA seq
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MLLSLFSCAVGFSLLPFLLFPYPTQGCPARCECSVPTRSVSCHRKRLAQVPEGIPIETRA
LDLSKNRLRIITPQNFSGLLLLEELDLSTNLLSSVEPGSFRAQPRLRTLRLRNNQLTLLP
RGALAGLSELTLLDISQNRLVILLDYGFEDQRRLRVLELADNELVFVAPRAFSGLPALRS
LTLQRCNLSAVPSHALAHLHGLTSLRLRQLDIAELLPHTFKGLGRLRHLEVDYWPALEAV
PSLALQGLNLSTLFITHTNLSTVPVLSHLSYLTHVNLSYSNVRVLPAGWLRGLDRLEVLQ
VRKAQLVRVEAQAFQGALSLRLLDLSYNRLTTLERATLPVSVALQNLLIGQNPLVCDCRL
RWLLQRTLSLQFGEVQPQCTTPAALAGKSFGDVVEPLLSRYVICTKPRVIAMSTQPAQAE
EGQKAWLYCTADGAPPPSVSWLTPHRRHITIKSTGRMVVHSNGSLEFRVVEPQDSGIYIC
VASNPAGNSTLSITLAVKSLGLRDGALYANRSFIFDPDYNSSSINGTEHYTIRMVLDFTT
ILVSTAMGCLSFLGVVLFCFLLLFAWSRGKGKHRGSVDIQYVPRKRKGASSELTETSGPR
RVNMKMI
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgctgctctctttgttctcctgtgctgtgggcttctccctcctaccgttcctcctgttt
ccataccccacccagggttgccctgcccgctgtgagtgttctgtgcccacacgctcagtc
tcttgccaccgtaagcggctggcacaggtgcccgagggcatccccatcgagacaagagca
ttggatctcagcaaaaaccggctgcgtatcatcacaccacagaatttctctggcctcctg
ttgctagaggagcttgacttgagcaccaacctgttgtcatctgtagagcccggaagtttt
cgcgcccagccgcgcttacgaacattgcgtctgcgcaacaatcagctgaccctcctgcct
cgtggtgcacttgccggcctgagtgagctcactcttctggacatcagccagaaccgtctg
gttatcttgcttgattatggctttgaggaccaacggcgtctgcgtgtgcttgaacttgct
gacaatgagctggtttttgttgcaccccgtgccttcagtggcttgcctgcattgcgctca
ctgaccctgcagcgctgtaacctaagtgctgtgcccagccatgcactggcgcacttgcat
ggtctaaccagccttcgccttagacagctggacattgcagaattgctaccacataccttt
aagggcttgggccgtctccgtcatcttgaggtggattattggccagcactggaagctgtg
ccctctcttgccctgcagggtctgaatcttagcacgctcttcatcacccataccaatctt
tcaacagtaccagtgctgagccacctgtcctacttgacccatgtgaacctgtcctacagc
aatgtgagggtgctgccagctggctggctgcgtggcctggataggctggaagtgctgcag
gtacgcaaggcacagttggtgcgtgtggaggctcaggccttccaaggggcactgtcactt
cgcctgcttgacctatcctacaatcgcttgactacgttggaaagagccacactgccagtg
tctgtggccctgcagaacctactgattggccagaacccattagtgtgcgactgccgtctg
cgatggctacttcaaaggacactgtccctacagtttggggaggtgcaacctcagtgcaca
acccctgccgctctcgctggaaaatctttcggtgatgtagtagagccactgctttctcgc
tacgtcatatgcaccaaacccagggtcattgccatgtcgacacaaccagcccaagcagaa
gagggacaaaaggcatggttgtactgcacagcagatggcgcaccacccccctctgtctcc
tggctgacaccacataggcggcacatcaccatcaaaagcacagggcgcatggttgtccat
agcaacggttcactggagttccgggtagtggagcctcaggacagtggcatttatatctgt
gtggcatccaatcctgcaggcaattccactctctccataacactagctgtcaaaagtctg
ggccttagagatggggctctctatgccaaccgcagcttcatctttgatcctgattacaat
agctcctcgatcaatggcacagagcattacacaatcaggatggtgctggactttactacc
attcttgtgtctacggctatgggctgtctcagcttcctgggtgtggtccttttctgtttc
ctgcttctcttcgcttggagccgaggcaaaggcaagcacagaggaagtgtggacatccaa
tatgttccacgcaagaggaaaggggccagcagtgagcttactgagaccagcggccccaga
cgtgtcaacatgaagatgatctga
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