Tachysurus fulvidraco (yellow catfish): 113644982
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Entry
113644982 CDS
T08119
Symbol
mlh1
Name
(RefSeq) DNA mismatch repair protein Mlh1 isoform X1
KO
K08734
DNA mismatch repair protein MLH1
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd03430
Mismatch repair
tfd03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
113644982 (mlh1)
03460 Fanconi anemia pathway
113644982 (mlh1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tfd03400
]
113644982 (mlh1)
DNA repair and recombination proteins [BR:
tfd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
113644982 (mlh1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
113644982
NCBI-ProteinID:
XP_027006014
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Position
4:complement(8275393..8302571)
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AA seq
717 aa
AA seq
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MAGVIRRLDETVVNRIAAGEVIQRPANAIKEMMENCLDANSTNIQLIIKEGGLKLIQIQD
NGSGIRKEDLEIVCERFTTSKLQTFEDLASIATYGFRGEALASISHVAHVTITTKTADAK
CAYRSCYCDGKLKAPPKPCAGNQGTLITVEDLFYNVQTRRKALKSPSEEYAKIVEVVSRY
AIHNSGKSFTVKKQGEMVADVKTFANASVLDNIRLVFGVALSREMIEVGCEDQKLSFKMN
GYASNANYSVKKCILILFINHRLVESSALKKAVETVYAAYLPKNTHPFLYLSLEIAPYNV
DVNVHPTKHEVHFLHEDCIIGSIQKHIESKLLGSNSSRTYFTQTLLSGLSVTVSEVKSSS
EADPIERVCANQMVRTDSKTQKLDSFLQPANKLSSVSCLIASQPSPVPATIHFEAIMNEG
PKECLVSATNDMQTDIESEAPMRKRPHVDVDEEKADVTVACTSWRRDIRLTSVKELQKEI
TEQTHKGLQEILHNHSFVGCINPQWSLVQHHTKLYLLNTTRLSQELFYQILTFDFGNFDV
LWLSNPAPLYDLALMALDSEESGWTEEDGPKEGLAQYIVNFLKKKAEMLDDYFSIKIDEE
GNLTGLPLLLDKYSPAMEGLPLFILRLATEVNWDSEKDCFHDFNKECSYFYSIRKEYTLE
PEAGTDHADAELSWQWKVEHILFKAMRSINPPKQCSEDGSVLHIANLPDLYKVFERC
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atggccggcgtgatccggaggctggatgagaccgttgtgaaccgcattgctgctggagaa
gtcattcaacgacctgctaatgcgattaaagaaatgatggagaattgcctggatgcaaat
tccaccaacattcagctgattatcaaagaagggggactgaagctgatccagattcaagat
aatggctctggaattaggaaagaagacctggaaattgtttgtgagcgttttacaacgagc
aagcttcaaacatttgaggatcttgcatcaattgcaacttatggttttagaggagaggca
cttgccagcataagtcatgtagcccatgttaccattaccacaaaaacagcagatgcaaaa
tgtgcttatcgatcatgctactgtgatgggaaactgaaagccccacctaagccttgcgct
ggaaaccaagggacactgatcacagtagaagatctgttctataatgtacaaacccgaagg
aaagccctcaaaagccccagtgaagaatatgccaagattgtggaagttgtcagtagatat
gccattcacaattctgggaaaagctttacggtcaaaaaacaaggagagatggtggctgat
gtgaagacttttgccaatgcctcagttttggacaatattcgtttggtgtttggggtagct
ttaagcagggagatgatagaagtgggttgtgaagatcaaaagctttctttcaaaatgaac
ggttatgcctcaaatgccaactactcagtcaagaagtgtatcctcatcctgttcatcaat
catcgtttagtggaatccagtgccttgaagaaggcagttgagacagtctatgcagcatat
cttcccaaaaacacacatccttttctttatctcagtttagaaattgcaccttacaatgtt
gatgtgaatgtgcatcccaccaagcatgaagtgcacttccttcatgaagactgcatcatt
ggaagcattcagaaacacattgagagtaaactacttggctccaattcatcccgtacttat
tttacacagactttactttctggactctcagtaactgtcagcgaagtaaaaagcagttca
gaagctgaccccattgagcgtgtctgtgccaatcaaatggtgcgaactgacagcaagaca
caaaaactagactcttttctacagccagcaaataaactttcttcagtttcttgccttata
gcaagtcaaccaagccctgtaccagctactattcattttgaagcaataatgaatgaaggt
cctaaggagtgtctggtcagtgccacaaatgacatgcagactgatatagagtcagaggct
cccatgaggaaacggccccatgttgatgttgatgaggaaaaggcggatgtgacagtagcc
tgtacttcatggagacgggacatcaggctaaccagtgtgaaggaacttcaaaaggaaatc
acagaacaaacccataaaggtttgcaggagatactacataatcattcatttgtaggatgt
atcaatccccaatggtctctagtccaacaccacactaaactgtatctgttaaacaccacc
aggctcagtcaggagctgttttaccagattttgacgtttgattttggtaacttcgatgtt
ctttggttgtcgaatccagcccctctttatgaccttgccctcatggcactggactcagaa
gagagtggctggacagaggaggatggccctaaagaaggactggcccagtatatagtaaat
ttcttgaagaaaaaagctgaaatgttggacgattatttctccatcaaaatagatgaggaa
gggaatctgactggtcttccacttcttctggataagtatagtcctgcaatggaaggactg
ccattgttcatcctgcgcttagccacagaggtgaactgggacagtgaaaaggattgtttc
catgacttcaacaaagaatgcagttacttttactccataagaaaagagtacacactggag
ccagaggcaggaacagaccatgcagatgcagagctgagctggcagtggaaggttgaacac
attctcttcaaagcaatgcgctctatcaacccaccaaaacagtgtagtgaagatggcagt
gtcctccatatagccaaccttcctgacctctataaagtgtttgagagatgctaa
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