KEGG   Tachysurus fulvidraco (yellow catfish): 113645008
Entry
113645008         CDS       T08119                                 
Symbol
nle1
Name
(RefSeq) notchless protein homolog 1
  KO
K14855  ribosome assembly protein 4
Organism
tfd  Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:tfd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:tfd03009]
    113645008 (nle1)
Ribosome biogenesis [BR:tfd03009]
 Eukaryotic type
  Pre-60S particles
   Other pre-60S particles
    113645008 (nle1)
SSDB
Motif
Pfam: Beta-prop_WDR3_1st Beta-prop_WDR5 WD40 Beta-prop_IFT122_1st Beta-prop_THOC3 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_WDR3_2nd Beta-prop_EML_2 WD40_Gbeta Beta-prop_WDR36-Utp21_2nd EIF3I WD40_MABP1-WDR62_2nd WDR55 ANAPC4_WD40 DSE1_N Beta-prop_Aladin ASA1 Beta-prop_WDR90_POC16_2nd WDR90_beta-prop_4th Beta-prop_WDR75_1st Beta-prop_WDR19_1st Beta-prop_EML Beta-prop_SCAP Beta-prop_WDR36-Utp21_1st Beta-prop_TEP1_C NBCH_WD40 WD40_MABP1-WDR62_1st Beta-prop_WDR41 Beta-prop_RIG_2nd CFAP251_N NLE Beta-prop_IFT140_1st Beta-prop_EIPR1 Beta-prop_VPS8 Beta-prop_DCAF12 Beta-prop_WDR35_TULP_N Beta-prop_NOL10_N PAC11 Beta-prop_DCAF4 eIF2A Beta-prop_HPS5 TRM82_WD WD40_RFWD3 Tricorn_2nd Beta-prop_Nup120_160 RMC1_N Beta-prop_SPT8 PD40 Ge1_WD40 Beta-prop_RIG_1st Beta-prop_NWD2_C Beta-prop_WDR75_2nd WDR54 Cytochrom_D1 FAD_binding_9 Tenui_PVC2
Other DBs
NCBI-GeneID: 113645008
NCBI-ProteinID: XP_027006075
LinkDB
Position
20:complement(11753059..11759989)
AA seq 476 aa
MSGDVERMLIQFQDEGGEPLGSPFDVPLNITPDKLQLVCNALLQKEEPVPLLFFVHDAEV
VSSLGACVQTLGVETEQVLPVVYQPQAVFRVRAVARCTSSLEGHTEAVISVAFSPTGKYL
ASGSGDTTVRFWDLTTETPHHTSKGHKHWVLSIAWSPDGKKLASGCKNSQILLWDPVTGQ
QIGKTLNGHTKWITWLCWEPLHLNPECRYLASSSKDGSVRIWDTVLSRCDKILTGHTQSV
TCVKWGGDGLLYTSSQDRTIKVWRAKDGVQCRTLQGHAHWVNTLALSTDYVLRTGAFEPA
TATINPQDLTGTLEEIKERALQRYNKVRGEASERLVSGSDDFTLFLWNPAEEKKPVARMT
GHQALVNEVLFSPDTRLLASASFDKSIKIWDGRTGKYLTSLRGHVAAVYQVAWSADSRLL
VSGSSDSTLKVWDVKTGKLSVDLPGHADEVFAVDWSPDGQRVASGGKDKCLRIWRR
NT seq 1431 nt   +upstreamnt  +downstreamnt
atgagtggggacgtggagcgtatgttaatccagtttcaggatgaaggtggagaacctctc
ggatctccgtttgatgtcccacttaacataaccccagataagctgcagctggtctgtaat
gccttgttacaaaaggaagagccggtgccactgctgttttttgtgcacgatgctgaggtg
gtgtcatccctgggggcttgtgtgcagactcttggtgtggaaacggagcaggtgttgcca
gtagtgtaccaaccacaagccgtgttccgcgtgagagccgtggctcgctgtaccagttca
ctggagggccacactgaggctgtcatctcagtggccttcagtcctactgggaaatacctg
gctagtggttctggagatacgaccgtgagattttgggatctgaccacggagactcctcat
cacacttccaaaggccataaacactgggttctgtctatcgcctggtctccagatggcaaa
aagttagcgtcagggtgtaaaaacagtcagattctcctgtgggacccggtaacaggacag
cagataggaaagactctgaatggacacactaaatggatcacttggctgtgttgggagcca
ttacacctgaaccctgaatgccgatacttggctagctcttctaaagatggctcggttcgg
atatgggacacggtgcttagccgctgtgataagatcctgactggccacacgcagtcagtg
acctgtgtgaaatggggaggcgacggccttctgtacacttcatcccaggacaggactatt
aaagtctggagggctaaagatggggttcagtgtcgaacactgcagggtcatgctcactgg
gtgaacacgctggctctcagcactgactacgtcctccgtacaggagcctttgaaccagcc
actgctaccattaaccctcaggaccttactgggacattggaagaaatcaaagagagagca
ctgcagcgatataacaaagtcagaggtgaagcttctgagagactggtgtcaggttctgat
gacttcacactcttcctgtggaatccagcagaggagaagaagcctgtggctcgaatgact
ggacaccaggctctggtcaatgaagtcctcttttcccctgacacacgactgcttgcaagc
gcttctttcgacaagtctatcaagatctgggatggcagaactggcaagtatttaacgtca
ctccggggtcacgtggccgctgtttatcaggtagcgtggtcagcagacagccgtctgttg
gtgagcgggagcagcgacagcaccctgaaggtgtgggatgtgaagacgggcaaactgagt
gtggatctgcctggacatgctgacgaggtgtttgctgtagattggagtcctgatggtcag
cgagtggccagtggtgggaaagacaaatgtctacggatatggaggaggtag

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