KEGG   Tachysurus fulvidraco (yellow catfish): 113645120
Entry
113645120         CDS       T08119                                 
Symbol
polr2ea
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC1
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
tfd  Tachysurus fulvidraco (yellow catfish)
Pathway
tfd03020  RNA polymerase
tfd03420  Nucleotide excision repair
tfd04623  Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:tfd00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    113645120 (polr2ea)
  09124 Replication and repair
   03420 Nucleotide excision repair
    113645120 (polr2ea)
 09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    113645120 (polr2ea)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tfd03021]
    113645120 (polr2ea)
   03400 DNA repair and recombination proteins [BR:tfd03400]
    113645120 (polr2ea)
Transcription machinery [BR:tfd03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     113645120 (polr2ea)
  RNA polymerase III system
   RNA polymerase III
     113645120 (polr2ea)
  RNA polymerase I system
   RNA polymerase I
     113645120 (polr2ea)
DNA repair and recombination proteins [BR:tfd03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      113645120 (polr2ea)
SSDB
Motif
Pfam: RNA_pol_Rpb5_N RNA_pol_Rpb5_C NYD-SP12_N NA-iREase1
Other DBs
NCBI-GeneID: 113645120
NCBI-ProteinID: XP_027006231
LinkDB
Position
22:5067874..5072495
AA seq 210 aa
MDDEEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLDEFKSQFGDKPSEGRPRRTDLTV
LVAHNDDPTDQMFVFFPEEPKVGIKTIKMYCQRMQEENITRAIIVVQMGMTPSAKQSLVD
MAPKYILEQFLQQELLINITEHELVPEHIVMTKEEVTELLARYKLKESQLPRIQAGDPVA
RYFGLKRGQVVKIIRPSETAGRYITYRLVQ
NT seq 633 nt   +upstreamnt  +downstreamnt
atggatgatgaagaggagacttaccgactctggaaaatccggaagacgataatgcagctt
tgtcacgatcgaggatacttggtgacgcaggatgagctggatcagacgctggacgagttt
aaaagtcagttcggggacaagccgagcgagggccgtcctcggaggacagatctcacagtg
ctcgtcgctcacaacgatgatcccactgaccagatgtttgtcttcttcccagaggagccc
aaggtgggaattaaaaccatcaaaatgtactgccagcgaatgcaggaggagaacatcacc
cgcgccattattgtagtccagatgggcatgacaccttctgctaaacagtcgctggtagac
atggcaccaaagtacatcctggagcagttcctgcaacaagagctgctcatcaacatcaca
gaacacgagctggtccccgagcacatcgtcatgacgaaggaagaagtgacagagctgcta
gcgagatataagctgaaggagagccagttacccaggattcaggctggagacccagtagca
cgatatttcgggctgaaaagaggccaggtggtgaagatcatccggccgagtgagaccgca
ggtcgttatataacctacagacttgtacagtga

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