Tachysurus fulvidraco (yellow catfish): 113645172
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Entry
113645172 CDS
T08119
Symbol
gtf2b
Name
(RefSeq) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
113645172 (gtf2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tfd03021
]
113645172 (gtf2b)
Transcription machinery [BR:
tfd03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
113645172 (gtf2b)
Prokaryotic type
Archaeal type
TFB
113645172 (gtf2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Cyclin_C
RB_B
BRF2-like_C_cyclin_rpt
Sigma70_r4
KIF9
Harpin
Motif
Other DBs
NCBI-GeneID:
113645172
NCBI-ProteinID:
XP_027006349
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All DBs
Position
11:complement(21133250..21143690)
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AA seq
316 aa
AA seq
DB search
MASTSRGDALPKVQCPNHPDALLVEDYRAGDMICPECGLVVGDRVIDVGSEWRTFTNEKA
TKDPSRVGDAQNPLLNGGDLTTMIGKGTGSASFDEFGNSKYQNRRTMSSSDRAMLNAFKE
ISTMADRINLPRNIVDRTNNLFKQVYEQKSLKGRSNDAIASACLYIACRQEGVPRTFKEI
CAVSRISKKEIGRCFKLILKALETSVDLITTGDFMSRFCSNLGLPKQVQMAATFIARKAV
ELDLVPGRSPISVAAAAIYMASQASAEKKTQKEIGDIAGVADVTIRQSYRLIYPRAADLF
PPDFKFDTPVDKLPQL
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctacaagccgtggagatgctcttcccaaagtgcagtgccctaatcaccccgat
gccctgctggtggaggactacagagccggcgatatgatctgccccgagtgtggccttgtt
gtcggcgaccgtgtgattgacgtcggctcagagtggaggacgttcacgaacgagaaagct
accaaagacccgtcacgtgtcggcgacgcacagaacccgctcctcaacggaggagacctc
acaacgatgatcggaaaaggaacaggttctgcgagtttcgatgagttcggaaactccaag
tatcagaaccgcaggacgatgagcagctcggacagagccatgctgaacgcctttaaagag
atctccaccatggcggacaggataaacctgccacgaaacatcgtcgatcgtaccaataac
ctttttaagcaggtttatgaacagaagagtctgaaaggcaggagtaatgatgcgatcgct
tcagcctgcctctacatagcatgcagacaggagggagttccccgaacgtttaaagaaatc
tgcgctgtgtcccggatttctaagaaggagatcggccgctgctttaaactcatcctgaag
gccctggagacgagcgtggacctcatcaccaccggagacttcatgtctcgtttctgctcc
aacctgggccttccgaagcaggtgcagatggcagccaccttcatcgccaggaaggccgtg
gagctcgacctggtcccgggacgcagccccatcagcgtggctgctgccgccatctacatg
gcatctcaggcctctgctgagaagaagactcagaaagaaattggagatatagccggagta
gccgacgtcaccatccgccagtcgtatcgtctcatctacccacgtgccgctgacctcttc
cctccagacttcaagttcgatacaccagtagataaactgcctcagctgtga
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