Tachysurus fulvidraco (yellow catfish): 113645252
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Entry
113645252 CDS
T08119
Symbol
uba52
Name
(RefSeq) ubiquitin-60S ribosomal protein L40
KO
K02927
ubiquitin-large subunit ribosomal protein L40e
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd03010
Ribosome
tfd04120
Ubiquitin mediated proteolysis
tfd04137
Mitophagy - animal
tfd04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
113645252 (uba52)
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
113645252 (uba52)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
113645252 (uba52)
04137 Mitophagy - animal
113645252 (uba52)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
tfd03011
]
113645252 (uba52)
04121 Ubiquitin system [BR:
tfd04121
]
113645252 (uba52)
Ribosome [BR:
tfd03011
]
Ribosomal proteins
Eukaryotes
Large subunit
113645252 (uba52)
Archaea
113645252 (uba52)
Ubiquitin system [BR:
tfd04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
113645252 (uba52)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Ribosomal_L40e
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
DUF2604
Ubiquitin_5
TBK1_ULD
zf-C4pol
OTU1_UBXL
Dsc3_N
Motif
Other DBs
NCBI-GeneID:
113645252
NCBI-ProteinID:
XP_027006562
LinkDB
All DBs
Position
22:complement(4982953..4984703)
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AA seq
128 aa
AA seq
DB search
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGIIEPSLRQLAQKYNCEKMICRKCYARLHPRAVNCRKKKCGHTNN
LRPKKKLK
NT seq
387 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcttcgtgaaaacgttgaccggcaaaaccatcaccctcgaggtggagcctagc
gacactatcgagaacgtcaaagccaagattcaagacaaggaaggtatccctcctgaccag
cagcgtctgatttttgctggcaagcagttggaagatggacgcacactgtcagattataac
attcagaaagagtccaccctgcacttggtgctccgactgagaggagggatcatcgagcct
tccctcaggcagctggcgcagaaatacaactgcgagaagatgatctgccgcaaatgttac
gcacgccttcacccccgtgccgttaactgccgcaagaagaagtgtggacacaccaacaac
ctgcgccccaagaagaagctgaagtaa
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