Tachysurus fulvidraco (yellow catfish): 113645521
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Entry
113645521 CDS
T08119
Symbol
fbxo18
Name
(RefSeq) F-box DNA helicase 1 isoform X1
KO
K10300
F-box DNA helicase 1 [EC:
5.6.2.4
]
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tfd04121
]
113645521 (fbxo18)
Enzymes [BR:
tfd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
113645521 (fbxo18)
Ubiquitin system [BR:
tfd04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
113645521 (fbxo18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
UvrD_C_2
F-box-like
AAA_19
Viral_helicase1
F-box
AAA_30
PhoH
AAA_11
ResIII
AAA_12
AAA_22
DUF1248
SENP3_5_N
Motif
Other DBs
NCBI-GeneID:
113645521
NCBI-ProteinID:
XP_027006966
LinkDB
All DBs
Position
19:complement(15250802..15265012)
Genome browser
AA seq
1041 aa
AA seq
DB search
METSSKGKAKRRHLSATECSGLTQSLTGSPAITQPFIVNLHHKDPNKGLQPRTPTKRKRI
DGRQQKAITGFFPSAGVLSSSPQKGNSAKMEPGLNCHTVLKEKEEVQHDVTELMEGITEE
MFVDDEEFETGICSVKKEENEQEVMRAGCSSWASPSHSSFHNGYVKKEEKEDEEYDVQSL
PDAHYGLLGLNQMLLEPQGHIQDLPGELLSVIFAQLPADDLYRHVSLVCRHWRDIVMNSQ
FLPWKKLYYRYQKQEEMAVKQLKSLVEDNGIVRKDDLCVLNMVRYMAQFKHSRWVNVEDV
LRCVKGHRLYAQAEACIKHRLPDVETIDGGPNPWSAMALMLILADGLIDVLDLVTRLRTS
GCLPTPDLISEFLWAMATLLLTMRNTNINITNRWHYNIFYVLHLMENAPPPLSHGDGREK
QIYVTHEQQQILNHNIQRHHIVKIMAFAGTGKTTTLVKYAEQRPHLRFLYISFNKSVAMQ
AKHSFPFNVECRTIHSMAYQAIGRRYKNLSKLSSGLKPFTIAWVLPEGHGGFVNAKVVTE
TINNYCSSTDECIGPQHVPERYKNTNGREECPTEHKKKEFALDAQNIWKKMTELKPTKEA
AHHITHDGYLKLWQLQKPELKDYDSIFIDEAQDCTPVIMDIMLSQSCGKILVGDPHQQIY
TFRGAVNALHTVSHTHLYYLTQSFRFGSEIAYVGATVLDVCKKVKKILVGGRQDGIVRGE
DNETLDNIRLARTQVEGKVAILCRCNVTVFSEAVRLTDVNPICKIHIVGGVDNFGLKQIL
DIWILMQPEDKRRNECLWIKDSFIRSFCSEKLGGYAGLKKYATHTEDRELEAKLSVVEKY
NKRIPELVDRIYNRAQSKPNCADYIIGTVHKSKGLEFDTVVVMDDFIKVPCSRHNLQRMN
INPGIKTADADEWNLLYVAVTRAKRALYITKSVSNILTLAGEYFLRFEMTSTLLNKDLHR
RCSTRECPNLLTTESPLSMHKLPIRYMDTAEEGGVLCATCVEQRVGPVAYLLSPPETVKS
MHYTEERPELPVNIAMLLALL
NT seq
3126 nt
NT seq
+upstream
nt +downstream
nt
atggagacgtcctcaaaaggaaaggccaagcggaggcacctgagtgcaacagagtgcagc
ggtttaacccaaagcctcaccggaagtccagcaatcacacaacctttcatcgtgaacctc
catcataaagaccctaataaaggccttcaacctaggacaccgactaaaaggaaacgaata
gatggccgacaacagaaagccattacaggtttctttccctctgccggggtcctgagcagc
agcccgcaaaaaggcaactcggcgaagatggagccaggactgaactgtcacactgtcctg
aaagagaaggaagaggtgcagcatgatgtgacggagctcatggaaggcattactgaagag
atgtttgtggatgatgaggagtttgagacaggcatttgttctgtaaagaaagaggagaat
gagcaggaggtgatgagagcaggatgcagcagttgggcttctccatctcactccagcttt
cataatggatacgtgaaaaaggaggaaaaagaagacgaagagtatgatgtgcaaagcctc
cctgatgctcattatgggttactgggattgaatcagatgctactggagcctcaaggtcac
attcaggacttgcctggagagctcctgagtgttattttcgcacagctcccagcagatgat
ctttaccgccatgtcagtctggtgtgtcggcactggagagacattgtcatgaacagccag
tttcttccatggaagaagttgtactacagataccagaagcaggaggaaatggcagtgaag
cagctgaaatccctcgttgaagacaacggcattgtcagaaaggatgatctctgtgtgctg
aacatggtgaggtacatggcacagtttaaacacagcagatgggtgaacgttgaagatgtt
ttgcggtgtgtgaaaggacatcggctctatgcccaggcagaggcctgcatcaagcacagg
ctgccagacgtcgagacgatcgacggaggaccaaacccctggtctgccatggctctgatg
ctgatccttgcagatggattgattgatgtcctggacctggtgactcgtttacgaacctct
ggctgtttaccgactccggacttgatctcggagttcctatgggccatggctacactgctc
ctgaccatgaggaacactaacattaacatcactaacaggtggcattacaatattttttat
gtgttgcatctaatggagaatgcacctccgcctctgagtcacggtgacggcagggaaaag
cagatatacgtcactcatgaacagcagcagatcctcaatcacaacatacagagacaccac
attgtcaaaatcatggcttttgctggtactggaaagacgacgactctggtgaagtacgca
gaacaacggcctcatttgcgcttcctctacatttcctttaacaagtctgtggccatgcag
gccaaacacagtttcccttttaatgtagaatgcaggaccatacactctatggcctaccaa
gctatcggacgcaggtacaaaaatttaagtaagctaagtagtggtctgaaaccattcaca
atagcctgggtgcttcccgagggccacggtggctttgtcaacgccaaggtcgtaacagaa
accatcaacaactattgttcctccacggatgagtgtattggcccacagcacgtcccggaa
cgctacaagaataccaacggacgtgaggagtgtccaaccgaacacaaaaagaaggagttt
gcacttgacgcacaaaacatttggaagaaaatgaccgagctgaaacccaccaaagaagca
gcgcaccacataacccatgatggttacctcaaactgtggcagttacagaagcctgaactc
aaagactatgattcgattttcatagacgaagctcaggactgcactccagtcatcatggac
atcatgctttctcagtcttgtggaaagatcctggttggagatccccatcagcagatatac
accttcagaggagctgtcaatgctttacatactgtttctcacacacatctttactaccta
acacagagttttagattcggctctgagatcgcctacgtcggtgcgacggtcctagatgtc
tgcaaaaaggtgaaaaaaattttggtcggtggacgacaggacggcatcgtgagaggtgag
gacaacgagactctggacaacataagactggctcgtacacaggttgaaggaaaggtagcc
attttgtgccgctgtaatgtaaccgtgttcagtgaagcggtgcggctcaccgacgttaac
cctatctgcaagatccacattgtcggtggtgttgacaattttgggttgaagcaaatcctg
gatatctggattctgatgcagccagaggacaaacgtaggaacgagtgtttgtggattaag
gactcatttattcggagtttctgtagcgagaagctgggcgggtacgcaggcctaaagaag
tatgccacacacacagaagaccgtgagctggaagccaagctgtcagtggtggagaaatat
aacaagcgcattccagagctggtggatcggatctacaaccgtgctcagagcaagccgaac
tgcgcagactatatcataggcacggtgcataaatctaagggtctggagtttgacacggtg
gtggtgatggatgacttcataaaagtgccttgttccagacacaacctgcagaggatgaac
attaacccaggtattaaaacagctgacgcagacgagtggaacctgctgtacgtggccgtg
actcgagctaagagagcgctgtacatcaccaagagtgtcagcaacatcctcacacttgca
ggggaatactttctgaggtttgagatgaccagtacgcttttaaataaggatctgcatcgc
cgatgcagcaccagagagtgtcccaatctcctcactacagagtcaccactcagcatgcac
aaactccctattcgatacatggacactgcagaggaaggtggtgttctctgtgctacgtgt
gtggaacagcgtgtaggtcctgtagcttatcttctctctccacctgagacggtcaagtct
atgcattacacagaggagcgacccgagctgcctgttaacatcgccatgctgctggctctg
ctctaa
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