Tachysurus fulvidraco (yellow catfish): 113645575
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Entry
113645575 CDS
T08119
Symbol
hcfc1b
Name
(RefSeq) host cell factor 1b isoform X1
KO
K14966
host cell factor 1
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd03083
Polycomb repressive complex
tfd04980
Cobalamin transport and metabolism
tfd05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
113645575 (hcfc1b)
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
113645575 (hcfc1b)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
113645575 (hcfc1b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tfd01009
]
113645575 (hcfc1b)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tfd03036
]
113645575 (hcfc1b)
03029 Mitochondrial biogenesis [BR:
tfd03029
]
113645575 (hcfc1b)
Protein phosphatases and associated proteins [BR:
tfd01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
113645575 (hcfc1b)
Chromosome and associated proteins [BR:
tfd03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
113645575 (hcfc1b)
HMT complexes
COMPASS/SET1 complex
113645575 (hcfc1b)
MLL-HCF complex
113645575 (hcfc1b)
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
113645575 (hcfc1b)
Mitochondrial biogenesis [BR:
tfd03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
113645575 (hcfc1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_3
Kelch_5
Kelch_4
Kelch_1
Kelch_6
fn3
Motif
Other DBs
NCBI-GeneID:
113645575
NCBI-ProteinID:
XP_047678978
LinkDB
All DBs
Position
14:complement(3477392..3494342)
Genome browser
AA seq
1875 aa
AA seq
DB search
MASSGTNNTLSVSGSVLQPRWKRVLGWSGPVPRPRHGHRAVAIKELMVVFGGGNEGIVDE
LHVYNTATNQWFIPAVRGDVPPGCAAYGFVCDGTRLLVFGGMVEYGKYSNDLYELQASRW
EWKRLKPKAPKNGPPPCPRLGHSFSLVGNKCYLFGGLANDSEDPKNNIPRYLNDLYTLEL
RPGSNVAGWDIPITYGVLPPPRESHTAVVYTEKTSKKSRLVIYGGMSGCRLGDLWTLDID
TLTWNKPTISGTAPLPRSLHSATTISNKMYVFGGWVPLVMDDVKVATHEKEWKCTNTLAC
LNLDSMSWETILMDTLEDNIPRARAGHCSVAINSRLYVWSGRDGYRKAWNNQVCCKDLWY
LETDRPLAPSRVQLVRANTSSLEVSWGAVPTADAYLLQLQKYEIPAAATASSPGITPTSS
LPSNSPKSPALASPASQSMPVTGVTLVPQVPSPTTTMPGNPLAAASPRGPGKTILKVAAP
QAPAGTSIVTVRQASQVGKSPVTVASLPAGVRMVVPAQSGGTPIGSSPQMSGMAALAAAA
AATQKIPPSTTATVLNVPAGATIMKTVAVTPGSTALPATVKVASPVTVSNPATRMLKTAA
AQAGTSTITTPNTPTRPIITVHKSGTVTVAQQAQVVTTVVGGVTKTITLVKSPLTMGSGG
TLLSSLGKVMSMVQTKPVQSSAVTGQAGSPVTQIIQTKGPLPAGTILKLVTSADGKPTTI
ITTTQAGGTGTKPTILGISPTSTTKPGTTIIKTIPMSAIQQGAAGLSYCTTSGTGIKSPI
TIITTKMVTPGTPGKIITAVPKLAAGSAQQGLTQVVLKGAPGQPGTILRTVPMGGVRLVS
PGTVSGVKPTVTTLVVKGTTGVTTLGTVTGTISTSLAGGNVATANSSLATPITTLGTIAT
LSSQVINPTAITVSAPQTNLTTAPTVAIQAATQPTQVTLISTPSGVEAQQDLPVSILASP
TSEQPSTTGTDAGDAPGEVTLVCSNPPCETHETGTTNTATTVSANIGNERVCSNPPCETH
VTGTTNTTTTASSDMGRVQQVCSNPPCETHETGTTNTSTQASSNMGVETNTVQRVCSNPP
CETHETGTTNTATQASSSMGSAETNTVQKVCSNPPCETHETGTTNTATQASSSMGSTETN
TVQGVCSNSACESHETGTTNTATQASSSIGSAETNTVQRVCSNSRCESHETGTTNTPTQV
SSNMGSTETKTVQRACSNPPCETHETGTTNTPTQASSNIGTGQNGMVQRVCSNPPCETHE
TGTTNTATTATSSLESPEGTAQQSGDGQDAGTSAEATSLTESANPPIQSRAITTVTQATP
TPGPSVPEISSMAGSAAVAEGSGEAEAMDHGDSEAVAMGEEPMQTEAELGAEGAVRVVAI
EEGAAGEAGTMLQVHVAMEAQPGQGEQAEMDQGGDGAEAVALAGQDSEALALPQELMSAE
GQQATLMVTGLTPEELAVTAAAEAAAQAAATEEAQALAIQAVLQAAQQAVLNEGDSGQDG
QQTTTIPIVLTQQELAALVQQQQQLQEVQAAAAAAAAAASAQQLAAESSAAPLPTEGLAP
ADSLNDPTTESNGHEMAAAVTGAVAQLLPSTSAETLAPSSTLAPAQPMVVASPAKIQAAT
TLAEVANGIESAAGKPGAPPAVVKPPVKKENQWFDVGIVKVTNMVVTHYYVPADDSEVTD
DDSGAIPDYSQMKKVELSPGTAYKFRVAGINACGRGTFSEVSAFKTCLPGFPGAPCAIKI
SKSPDGAHLTWEPPSVTSGKIIEYSVYLAIQSSQTTEAKPSAPAQLAFMRVYCGPNPSCL
VQTSSLSNAHIDYTTKPAIIFRIAARNEKGYGPATQVRWLQETSKDGSAAKPAAKRPVSS
PDTKGTGPKKARADQ
NT seq
5628 nt
NT seq
+upstream
nt +downstream
nt
atggcttcttctggtactaacaacacattgagcgtttcgggctcggtgctgcagccgagg
tggaagcgggtgctcggatggtccggcccggtgcctcggcctcgtcacggacaccgcgcc
gtcgccattaaagagctgatggtggtgttcggcggcggcaatgaaggaatcgtggatgaa
cttcacgtgtacaacacagcgactaatcagtggtttatcccggctgtccggggcgacgtg
ccacctggttgtgctgcttatgggtttgtgtgtgacggcacccgactgttggtgttcgga
ggaatggttgaatatggaaaatacagcaacgatctctatgaactacaggctagtagatgg
gagtggaagcggctgaaacctaaagctccaaagaacggcccacctccttgtccacgcctg
ggtcacagcttctcccttgtggggaataaatgctacctatttggtggacttgccaatgac
agtgaagatcccaaaaacaatattccaagatacctgaatgacctgtacacgctcgagctg
cgcccaggatccaacgtggcaggctgggacatccccatcacatacggcgtgcttcctcca
cctcgtgagagccacacagccgtagtctacacagagaaaacctcaaagaagtctcgcctc
gtcatctacggcggcatgagcggctgccgcctcggagacctctggacgttagatatagac
acacttacatggaacaagccaacgatcagtggcactgctcctctccctcgcagtcttcac
tctgccaccaccatatctaacaaaatgtacgtgttcggtggatgggtgcctttggtgatg
gatgacgtgaaagtggctacgcatgaaaaagaatggaagtgtacaaacacactggcatgc
ctaaatctggactctatgagctgggagactattttaatggacactctggaagacaacatc
ccaagagccagggcagggcactgctctgtagccatcaactccagactttacgtctggagc
ggcagagacggctaccgcaaagcctggaacaaccaagtgtgttgcaaggacctctggtat
ttggagacagaccgccctctggcgccatctcgtgtgcaactagttcgtgccaatacaagt
tcactggaggtgagctggggtgctgtgcccactgctgatgcctacctgctgcagctgcag
aaatatgaaattccggcagcagcgacggcctcctcccccggcatcactcccacttcctcg
ctgccctcaaactcacccaagagcccggccctggcttcccctgcctcgcagagcatgcct
gtcacaggggtcacccttgtaccacaggttccctcacctaccacaaccatgcctgggaac
ccacttgctgcagcctcaccgcgtggcccaggtaaaaccatcttgaaagtggcagcacct
caggcccccgccgggacgtctatcgtcaccgtgcgtcaggccagtcaggtcggtaaatcc
ccagttacagtcgcgtctcttcctgctggggtccgtatggtcgttcctgcacagagcgga
gggacgccgatcgggagcagccctcagatgagcggcatggccgctctggccgcggctgcg
gctgccacgcagaaaatccctccttcgacgacggccacagttctgaacgttcccgcagga
gccactataatgaaaaccgtcgcagtcactccaggctccacagctcttcctgctacagtg
aaagtagcctcaccagtgaccgtgagcaatccagcgacccgcatgctgaagacggcggca
gctcaagccggaacttctaccatcactactcccaacacgccaacacgtcccatcatcact
gtgcacaaatctggcactgtgaccgtggcccaacaggcccaggtggtcaccaccgtggtg
ggaggagtcactaaaaccattacgctcgtaaagagcccgctgactatgggcagcggcgga
actctgctctctagcctggggaaggtgatgtccatggtccagactaaaccagttcagagt
tctgctgtgacgggacaagctggcagtcctgtcacacagatcatacagacgaagggtcct
ctgcccgcaggcaccatattgaagttagtcacctcggcggatggcaaacccaccaccatc
atcactaccacgcaggcaggtggcaccggcaccaaacccaccattctgggcatctcccct
acaagcactaccaaacctggcaccaccatcattaagaccattccgatgtccgctattcag
cagggagctgcgggtttgtcttactgtactacctctggcactggtataaagtctcctatt
actatcatcacaacaaaaatggtgacgcctggcacaccaggaaaaatcatcactgctgtg
ccaaagctggctgctggaagtgcacagcaaggattgactcaggtggtcctaaagggggca
ccagggcagcctggcaccattcttcgcactgtgcccatgggtggcgtgcgtctcgtttct
cctggtaccgtgtctggtgtcaaacccacggttaccacacttgtggttaaaggcaccaca
ggagtaactactcttggcactgtgactggaacaatttcaaccagcctggcagggggcaac
gttgccactgctaattctagtctggctacacccataaccaccctgggcaccatcgccaca
ctctccagccaggtgatcaaccccacagcaatcacagtgtctgcaccccagacaaacctg
actactgcacctacggtggccatacaggcagctacccagcccactcaagtgacactgata
agcacccccagtggtgtggaggcacagcaggacctcccggtgtccattctggcttccccc
acctctgaacagccctctaccacgggcactgatgcgggcgatgccccgggtgaagtcaca
ctggtctgttccaacccaccatgcgagacccacgaaaccggtacgaccaacacggccacc
accgtctccgccaacattggaaacgagcgtgtgtgttcaaacccaccctgtgagacacac
gtgaccggaacgaccaacacgacgaccacggcgtcgtccgacatgggccgcgtgcaacaa
gtatgcagcaacccgccatgcgaaacgcatgaaacgggcaccacaaacacatcaacacag
gcgtcctcaaacatgggcgtagagaccaacacagtacagagagtatgttccaacccacca
tgcgaaacgcacgaaactggcactaccaacacagctacacaggcatcttcaagcatgggc
agtgctgagactaacactgtacagaaagtgtgttctaacccaccttgtgagacccatgaa
accggcaccaccaacacagccacgcaggcatcttcaagcatgggcagcacagaaaccaac
actgtacaaggagtgtgttccaactcagcttgtgagagccatgaaaccggcaccaccaac
acagccacgcaggcatcttccagtataggcagtgcagaaaccaacacagtacagagagtg
tgttctaactcgcgttgtgagagccatgaaaccggcaccaccaacacacccacgcaggtc
tcttctaatatgggcagcacagaaaccaaaacagtacagagagcgtgttctaacccgccg
tgtgagacccatgaaaccggcaccactaatacaccgacacaggcttcatccaacatcggc
acaggacagaacggcatggtgcagagagtgtgttccaacccgccgtgtgagacacacgag
accggcaccaccaacacagccactactgccaccagcagcctcgagtcaccagaaggaaca
gcgcaacagagcggtgatggacaggacgccggcaccagcgccgaggcgacttcgttgaca
gaatctgctaatcccccgattcagagcagagccatcaccactgtgacgcaggccacgccc
accccaggaccctctgttcccgaaatctcatccatggcaggttctgctgctgtagcggag
ggctctggtgaagctgaggcaatggaccatggagactctgaagcagtagcgatgggagag
gagcccatgcaaactgaggctgaactgggtgccgagggagctgttcgagttgttgctatc
gaggagggtgctgctggtgaagctggcaccatgctgcaggttcacgttgccatggaagca
cagccaggccagggagagcaagctgagatggatcagggtggtgatggggcagaagctgtg
gctctggcagggcaggactctgaggccttggcgctgcctcaggaactaatgtcagccgag
gggcagcaggccacgttgatggtgactggactgaccccggaggaacttgccgtcactgct
gcagcggaagccgctgctcaggctgcagctacagaagaggcccaggcgctcgccatacag
gctgtgctgcaggcagcccaacaggccgtgctcaatgaaggagactcgggacaggacggt
caacagaccaccaccattcctattgtactgacgcaacaggaactggcagctctggttcag
cagcagcagcagctccaggaggttcaagcagcggcggccgcggcggcagctgccgcctcc
gcccagcaattggcggccgaatcgagtgcggctcccttgcccacagagggcctggcacct
gcggacagcctcaacgaccccacgaccgaaagtaacggtcatgagatggctgctgcagta
actggagctgtagctcagcttctacccagcacttctgcagagactttggctccatcaagt
acacttgccccagcccagcccatggtggttgccagccctgccaagatacaggctgccact
acgcttgctgaggtggccaatggcatagagtctgcagctgggaagccaggagcaccacct
gcggttgtgaaaccgccagtgaagaaagaaaatcagtggttcgatgttggaatagtcaaa
gtgaccaacatggttgtcacgcactattatgtcccagcagatgattcagaagtcaccgat
gatgattctggagccataccagactacagtcaaatgaagaaggtggagctatctcctggc
accgcttacaagttccgtgtggccggaatcaacgcttgtggccgtggaacgttttctgaa
gtgtccgcgttcaagacttgcttgcccggtttccctggagcaccgtgtgccattaaaatt
agcaagagtcctgatggtgcacacctcacctgggaacctccatcagtaacgtcagggaag
atcatagagtattccgtctacctggccatccagagctctcagacgaccgaggccaaacca
tctgccccggctcagctggcttttatgcgggtgtactgtgggccaaacccttcctgccta
gtccagacttccagcctgtccaatgctcacattgactacaccaccaaacccgccatcatc
ttccgcattgccgcccgcaatgagaagggctacggccctgctacgcaagtcaggtggcta
caagaaacgagtaaagatggatctgctgccaaacctgcagcaaagagaccggtttcatct
cctgatacgaaaggtaccggtccgaaaaaggcgagagctgaccagtga
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integrated database retrieval system
