Tachysurus fulvidraco (yellow catfish): 113645601
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Entry
113645601 CDS
T08119
Name
(RefSeq) HMG box transcription factor BBX isoform X1
KO
K21643
HMG box transcription factor BBX
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tfd03000
]
113645601
Transcription factors [BR:
tfd03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
113645601
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Gene cluster
GFIT
Motif
Pfam:
DUF2028
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
113645601
NCBI-ProteinID:
XP_027007117
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Position
20:complement(9808784..9850087)
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AA seq
883 aa
AA seq
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MKGGGGGKEVPAEGEVSSKQRPKRKCLQWHPLLSKKKALDFSEEEEEEDEEELEKVSLES
PEHSSQTPECVAMEDDGEEDSSEQRARRPMNAFLLFCKRHRSLVRQEHPRLDNRGATKIL
ADWWAVLEPSEKQKYTDMAKEYKDAFMKANPGYKWCPATSKPVKSPTHAVSNVRKKTWSV
PSNNTKDISVAKKVPKTDSTPQLNFAMADPTKMGGLSMLLLAGEHALTAREISSSNSQSG
VAEVAKHTGKSALFQLAEISSCPSQLVEGCKNSECRSAAAPQTEVCGLSQPNSPDLPSSC
MQSPLFQLAEISSSDSQVSVSEVKQCGQSALFQLAEMCLASEAEKLEALSSQPAMDSSSL
CAQDSAPNTTPTTDLPTLTSASSSPTSCKKKKKKPSDVSKGEKSPGSPKKPCKKRSSSSS
DLESLMYTIEAVAKGAWGSEEMENTRKRARPSGSPVLQPSTAEKKKTKLKVKKQLRTKEE
EEEKGEGEDCKTPEAEGSLLIHEAELKFECKDEADVKVDSTEDSEPHTSTAQQSKSVEPG
SPLPSRGEERELEVKPVVMQTEEKEIEPKPEACGSRKSERSCKGALYKTLVSEGMLTSLR
ANVDRGKRGSMRGTMSESEIGWTDESCNFSQPAASNPKKLKKSKSKEEPVPGNLGKLEEE
FEKKFNSLPQFSPLTFDKKSTAVTKRKKANVAHPLENSTSNKGPSPSQKKTLFHKIVSKY
KNKKEKAGTLDKAVAQPDATASDTGTAKADSSSASLSTETRKSGDVPVGSQKRKARKSKI
THLVRTADGRLSPAEADKVKELTQDQDGKPLTHETLCNTESCSTDPGPAESDSLPAFFSL
AALAEVAAMENMHRGQRAVAISAEGQVKDMAPQTPVLISCADQ
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atgaagggcggaggaggggggaaggaggtgccagcggagggcgaggtgagcagcaagcag
aggcccaaacgcaagtgcctgcagtggcacccgctgctttccaagaagaaggccctggac
ttctctgaggaagaggaagaggaggatgaggaagagctggagaaggtttcattggagagc
cctgagcacagcagtcagactcctgagtgtgtggcaatggaggatgatggtgaggaagac
tcttcagaacagcgtgctcgccggcccatgaatgctttcctgctattctgtaagcggcac
cgttcactggttcgccaggaacaccccagactggacaaccgtggagccaccaagatcctg
gcagactggtgggccgtgctggagcccagcgagaagcagaaatacaccgacatggccaag
gagtataaagatgcctttatgaaagcaaatccaggctataagtggtgtcctgctaccagc
aagccagtgaagagtcccactcacgcagtgagtaacgtgcggaagaagacctggtccgtg
ccctccaacaacaccaaggacatctctgttgccaaaaaagtgcccaaaaccgacagcaca
ccacagctaaacttcgccatggcagatccaactaagatgggtggcctgagcatgctgctg
ctagccggagaacacgccctgactgccagagagatctcgtctagtaattcacagagcggc
gttgcagaagttgcaaagcatactgggaaatctgcccttttccagttggctgagatttcc
tcctgtccatctcagcttgttgaagggtgtaaaaattcggagtgtcgaagcgcagcagcc
ccacagaccgaggtatgtggcctttctcagcccaactcgccagatttacccagcagctgc
atgcagtctcctctatttcagctggctgagatttcatctagtgattctcaggtttccgta
tctgaggtgaagcagtgcggccagtctgctctctttcagcttgcagagatgtgtttagca
tctgaagcagaaaaactggaggccctgtcctcccaaccagccatggactcttcctctctc
tgcgcccaggacagtgctccaaacacaacccccaccacggaccttcccaccctgacatca
gcctcatcctcaccaacgtcctgtaagaagaagaagaagaagccaagcgacgtatcaaaa
ggtgaaaaaagccctggctcgcccaagaaaccctgcaagaagcgttcttcgtccagctca
gacctcgagagcttgatgtacactattgaggcggtggctaaaggagcctggggctcagag
gagatggagaacaccaggaagcgagcacgtccttcaggcagtccggtgcttcagccttca
acagcagagaagaaaaagaccaaactcaaagtcaagaaacagctcaggaccaaggaggaa
gaagaggagaagggagaaggagaggactgcaaaacacctgaggcagaagggtctctgctt
atccatgaagcagagctgaaattcgagtgcaaggatgaagctgatgttaaagtggacagc
acagaggattcagagccacacacctctacagcacagcaaagcaaaagcgtagaaccgggc
tccccactgccaagcagaggagaagagagggagctggaggttaaacctgttgtaatgcaa
acagaagagaaggagattgagcccaaacccgaggcctgtgggtcacggaaatcagaacgg
agctgtaagggagcgctgtacaaaactctggtgtctgaaggcatgctgacgtcactgcgg
gctaacgtcgacagaggaaagcgaggctccatgcgaggcaccatgtccgagtctgagata
ggatggacggatgaaagctgtaatttcagccaacctgctgccagcaaccccaaaaaactg
aaaaagtccaaatccaaagaagagccagtgccaggcaatttaggaaagctggaggaggag
tttgagaagaagtttaacagcctgcctcagttcagtccgctaacgttcgacaaaaagagc
acagctgtcaccaaaaggaagaaagccaacgtagcccaccctctggaaaattctacgtct
aataagggtccatccccatctcagaaaaagactttattccacaagattgttagcaagtac
aagaacaaaaaggaaaaggctggaactttggacaaagccgtagcacagcctgacgcaacg
gccagcgacacaggcacggcgaaggcagactcctcgagcgcttcgctctctactgaaacc
cgtaagtcgggagatgtgcctgtgggcagccagaagaggaaggccagaaaaagcaaaatc
acacacttggtgcgcacagcagatgggcgactatcacccgctgaggcggacaaagtaaag
gagctgacccaggatcaggatggaaagccattaactcatgagactttatgcaacacagag
agctgctccactgaccccggaccagccgagtctgacagcctgccggccttcttcagtcta
gcagcgctcgccgaggtcgctgctatggagaacatgcatcgaggtcagcgtgcagtcgcc
atatctgccgaaggtcaggtgaaggacatggctcctcagactcctgtactgatctcctgt
gctgatcagtga
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