Tachysurus fulvidraco (yellow catfish): 113645618
Help
Entry
113645618 CDS
T08119
Symbol
ppfibp1a
Name
(RefSeq) liprin-beta-1 isoform X1
KO
K27096
liprin-beta
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tfd04131
]
113645618 (ppfibp1a)
Membrane trafficking [BR:
tfd04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
113645618 (ppfibp1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
SAM_PNT
PUMA_CC
SAM_3
Motif
Other DBs
NCBI-GeneID:
113645618
NCBI-ProteinID:
XP_027007129
LinkDB
All DBs
Position
19:complement(13823150..13848503)
Genome browser
AA seq
902 aa
AA seq
DB search
MMSDASEMLAAALEQMDGIIAGSKAMNYTNGLFDSQSPSSPMLGSLRAVHLLEELRGTLE
LMDADERENLCSQIPENTAEGLMEWLQTRLINGHGSSARDLAYQERLSRLESDKECLVLQ
VSVLTDQVEVQGEKIRDLEMCLEEHRMKLNATEELLQQELLSRSMLETQKLELLTEVSSL
KLKLTTADHEDKESEALYQVLSEMRHRATTAETEKVQQERSLKSTRDELVAMQKQLEERE
QELRRLKERAEVVTSDGSQSREKDLDVQRMKQVVESLMESNNEKERKIEELQQSLMLCRK
VQDAAMSVQEKNDRVDEEDTETGRCESSSKSATTTVTETHFLTGAGETDEPQVIPCTEFL
PKSSEYKFAADADPCLLTHSSSERLGSENSSNREEAESGESPDKKSSSLTLSPSQSSPGG
SESFGTKKIRSSFGRGFFKIRGGKRTASSPDLGEAERKRTEHLDLAGSQSPKPKEHAISP
ESKKKAKGIRRFFGMMRRSQSTSLNPEDAPESEFSRGGLRATAGPRLGWSRDSQRSNNNE
LNTSFASWSTEQVCEWLQEQGFSLYVSHAQRWIRSGQMLLNASQNDLEKELGIRHPLHRK
KLQLALQALGSEEDDAKSKLDFNWVTRWLDDIGLPQYKAQFDEGRVDARMLHYMTVDDLL
GLKVVSVLHHLSIKRAIQVLRISNYEPNCLRRRPSDENNITPEEVCQWTNHRVMEWLRSV
DLAEYAPNLRGSGVHGGLMVLEPRFNVEAMALLLNIPPNKTLLRRHLATHFHLLIGAEAE
RLKQECLEHPDYTLLNATAKVKPRRLSFGGFGTLRRKRQEESEEFLCPLEVQMPHNGSFH
REECISEDNLNQLEQMEDSEGTVKQIGAFSEGINNLTSMLKKDEFFKDTPSHSPTPYTNS
ST
NT seq
2709 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcagacgctagtgagatgttggcagctgccttggagcagatggatggaatcatc
gcaggctccaaggccatgaattacaccaacggtctgtttgacagccagtctcccagctcg
cctatgttaggcagcctgcgtgcagtccacctcctagaggaactgcgggggacacttgag
ctgatggacgcagacgagcgggagaacctgtgcagccaaatcccagagaacactgccgag
ggcctgatggagtggctgcagaccagactgattaacggtcatggatcctcagcgagggat
ttggcgtatcaggagagactgtctcggctagagagcgacaaggaatgtctggtgctgcag
gtgagtgttttgaccgatcaagtggaggtgcaaggagaaaagataagggacctagagatg
tgcctcgaggaacaccggatgaaactgaatgccacagaagaattacttcagcaggagttg
cttagcaggagcatgttagagacccagaaactggagttgttgacggaggtatccagcctg
aaactgaagcttacaaccgcagatcatgaggacaaggagagtgaggctctttatcaagtg
ctgagtgaaatgcgccacagagcgactactgcagagacagaaaaagtgcaacaggaaaga
agcctgaaatcaaccagagatgaactggtggctatgcagaagcagctagaagagcgggag
caggagctgaggagactgaaggagcgagctgaggtcgtgacctctgatggaagccagagc
cgagagaaagatttggatgtgcagagaatgaagcaagttgttgagtctttaatggagtct
aacaatgaaaaggaacgtaagattgaagagttgcagcagtccctgatgctctgtaggaaa
gtccaggatgcggcgatgtccgtgcaagaaaagaatgacagagtcgatgaagaagacaca
gagacgggacggtgtgaaagttcatccaaatccgcaaccactacagttactgagactcat
ttcctcacaggcgcaggggagactgatgagcctcaggtgattccctgcaccgagtttctc
cccaagtcctctgaatacaaattcgcagctgatgctgatccatgccttctaacacacagt
tcctctgagaggcttggatcagaaaactcatctaacagagaagaggctgagtctggagaa
agcccagataagaaaagcagctctctcacattgtccccctctcagtccagcccaggtggc
agtgaaagttttggcaccaaaaaaatacgctcctcctttggacggggtttcttcaagatc
cggggcggaaagagaaccgccagctctcctgatctaggtgaggcagagagaaagaggacc
gagcatttagatctggctggatctcaatctcccaaaccaaaggagcatgcaatctcgcct
gaaagcaagaagaaagctaaggggatccgaagattcttcggaatgatgaggaggagccag
tctacttcgctgaacccggaagatgctcccgagtcagagttcagtagaggcggccttaga
gccacagccggcccgagacttggttggtcacgtgactcgcaacgcagcaacaataatgag
cttaacacctcgtttgcaagctggagtacagagcaggtgtgtgagtggctgcaggagcag
ggcttcagtctgtacgtgagtcatgctcagcggtggatccgctctggacaaatgctacta
aacgcctcacagaatgatctcgaaaaggagctgggcatcagacatcctctacacagaaag
aagctccagcttgctcttcaggctctgggctcagaggaggacgacgctaaaagcaaactg
gacttcaactgggttactcggtggctggatgacattggactgcctcagtacaaagcccag
ttcgacgagggccgggtggacgcacgcatgcttcactacatgaccgtggatgatttgctg
ggtctgaaagtagtcagcgtgctacaccatctcagtatcaagagagccatccaagtgctg
cgcatcagcaactacgagcccaactgcctccgacgcagaccatctgatgagaataacatc
acaccagaagaggtgtgccagtggaccaatcacagagtgatggagtggctgcgctcggta
gacctggcggagtatgcacccaacctcagaggaagcggagtgcacggaggacttatggtt
ctagaacctcggttcaacgttgaggccatggccctcctcctgaacatcccacctaataaa
acgctcctgaggcgtcacctggccacccactttcacctcctgattggtgcagaagcagag
agactcaagcaggagtgtctcgagcatcctgactacacgctgctcaatgccacagcgaaa
gtgaagccgagacgtctgtccttcggtggtttcggtacgttgaggcggaagcgacaggag
gagagtgaagaatttctgtgtcctctagaagtgcagatgccccacaacggcagcttccac
agggaagagtgcatcagtgaggacaacctgaaccagctggagcagatggaggactcggaa
ggcacagtgaagcagatcggagccttttctgaggggatcaacaacctcactagtatgctg
aaaaaggacgagttcttcaaggatacgccgtctcactctccaactccatacaccaactcc
agcacgtga
DBGET
integrated database retrieval system
