Tachysurus fulvidraco (yellow catfish): 113645646
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Entry
113645646 CDS
T08119
Symbol
cald1a
Name
(RefSeq) caldesmon 1a isoform X1
KO
K12327
caldesmon
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
113645646 (cald1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tfd04812
]
113645646 (cald1a)
Cytoskeleton proteins [BR:
tfd04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
113645646 (cald1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caldesmon
Motif
Other DBs
NCBI-GeneID:
113645646
NCBI-ProteinID:
XP_027007162
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All DBs
Position
19:complement(11228012..11276531)
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AA seq
580 aa
AA seq
DB search
MDDDFELRREQRRQKREEMRLEAERMSYRRTEEDEEEAARERRRRARQERIRSKDGEEIA
NSAESVGLNSHSVTVTETSSELSSGQAGEGDEEEQALLDRLAKREERRQRRMKEALDRQK
QLESVDTPSYSTYSVESSSTTSYRAFSNQEDELELNSKEQAKEEVKEEVIPPKEVEEEEE
KPRRSYLREQEPTEEKAKIQDEGSTGQDVVCPSEKCKPLNEDLADSTVVTEQEVEEDAAQ
VDEDVEEVEENALEQMEDEDAGRKNKQQNGGVYEDSKHKKVERTQSRGSVHSSEDPAADE
GEDGEQTRLEAERKLEELKRRRDETEIEEFERMKQKQQEAEVELEELKRKREERRKVLEE
EERLKKQEETEKKAREEEEKRRMKDEIERRRAEAAERRQKVEEDVDGDGNKPFKCVSPRG
SSLKIGERAEFLNRSAQKSAVKASHSPVVSKIDNRLEQYTTAVRSNKEVRSPRVAAIDLP
VVSDGVRNIKSMWEKGNVFSSTMSTPSTNKDAAGIKVGVAGRINDWLNKTPEAKTPGGTP
VDLKPGDVTSKRSLWENKSSSATKVTSRGESKSVANGMGH
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atggatgacgactttgagttgcgcagggagcagaggagacagaagagagaggagatgcga
ctggaagcagaaaggatgtcctaccgtcggactgaggaggatgaggaagaggcagcccgt
gagcgtcggcgaagagcacgccaagaacgtatccgaagcaaggacggcgaagagatagct
aactcggccgaaagcgtggggctcaacagccacagtgtcacagtaacagagacaagttca
gagctgagctcgggccaggccggtgaaggagatgaggaggagcaggccctgcttgatcgc
ctggccaagcgtgaggagcgcaggcaaaggaggatgaaggaggcactggacaggcagaaa
cagctggagtccgtcgacacaccatcctacagcacctacagtgttgagagctcctctacc
acctcctaccgagccttcagcaaccaggaagatgagctggagctcaacagcaaggagcag
gcgaaagaggaggtgaaggaggaggtcattcctccgaaggaagtggaggaggaggaggag
aagccacgcaggtcttacttgagggagcaggaaccaactgaggaaaaagctaaaatacaa
gatgagggcagtacgggtcaggacgttgtctgtccaagtgaaaaatgcaagcctttaaat
gaagacctagctgattctacagtcgttacagagcaggaagtggaggaggatgcggcacaa
gtcgatgaggatgtagaggaagtagaggagaatgcgttagagcagatggaggatgaggac
gcagggaggaagaacaagcagcagaacgggggagtgtatgaggacagtaaacacaaaaag
gtggagagaacccagagtcgtggcagcgtgcactcttctgaagatccggcagcagacgaa
ggggaggacggggagcaaacgcgcttggaggccgagagaaagctggaggagctgaaaagg
aggagagacgagacggagatcgaggagtttgagaggatgaaacagaagcagcaggaagct
gaggtcgagctcgaggagctgaagaggaagagggaggaaaggaggaaggtgctggaggaa
gaagagaggctgaaaaagcaagaggaaactgagaagaaggcaagagaagaggaggagaag
aggagaatgaaggatgagatagagaggaggagagcagaggcagctgaacggaggcagaag
gtcgaggaagatgtagacggtgacggcaacaagccctttaagtgtgtgagcccacgtgga
tcctctctgaagattggtgaaagggcagaattcctcaacaggtcagcacagaagagtgcc
gtgaaggcgtctcactctcccgtggtgtcaaagattgacaacagattggagcagtacacc
acggctgtgcggagtaataaagaggtgcgctcaccacgcgtggctgcaatcgacctgcct
gtggtttctgatggtgtgcggaacattaagagcatgtgggagaagggcaacgttttcagt
tccactatgagcacgccctccaccaacaaggatgcagctggaataaaggtgggtgtcgca
ggccgcatcaacgattggctgaacaaaacacccgaggcgaaaaccccaggaggaacacct
gtggacctgaaacctggcgatgtaactagcaagcgcagtctatgggaaaacaaaagctcc
tctgctaccaaggtgacaagcagaggagaaagcaaatctgttgccaatggaatgggtcac
taa
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