Tachysurus fulvidraco (yellow catfish): 113645698
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Entry
113645698 CDS
T08119
Symbol
hdac6
Name
(RefSeq) histone deacetylase 6 isoform X1
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tfd01009
]
113645698 (hdac6)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tfd03019
]
113645698 (hdac6)
04131 Membrane trafficking [BR:
tfd04131
]
113645698 (hdac6)
03036 Chromosome and associated proteins [BR:
tfd03036
]
113645698 (hdac6)
Enzymes [BR:
tfd01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
113645698 (hdac6)
Protein phosphatases and associated proteins [BR:
tfd01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
113645698 (hdac6)
Messenger RNA biogenesis [BR:
tfd03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
113645698 (hdac6)
Membrane trafficking [BR:
tfd04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
113645698 (hdac6)
Chromosome and associated proteins [BR:
tfd03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
113645698 (hdac6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
Motif
Other DBs
NCBI-GeneID:
113645698
NCBI-ProteinID:
XP_027007258
LinkDB
All DBs
Position
14:complement(3437406..3454783)
Genome browser
AA seq
1096 aa
AA seq
DB search
MDSTSDRTPKGSQRSPKKTPQSSGKREKRNQKPNLQEVRNKGRRDRGKAEEEMTKKNMDP
HEKPKAVGTGLVYSELFSRYRCLWDSSHPECPERVTTVMGMMETEGLLSRCLQVEARAAS
DDELSQVHTREYIDLMRSTEKMTEEELKCVSDRYDSVYLHPDMFSCACLAAGSVLQLVDK
VMTSELRNGFAVCRPPGHHAQAEQMNGYSMFNNVAVAARYAQNQHGVQRVLIVDWDVHHG
QGIQYAFQEDPSVLYFSVHRYEGGSFWPHLPEGDSSAVGSGPGEGYNINVPWIKTGMEDG
DYIAAFQTILMPVAYEFQPQLVLVAAGFDSVAGDPKGEMCASPQCFSVLTHMLMGLAEGR
IVLSLEGGYNLQATAEGACSSLRSLLGDPCPHLNSPGAPSESALTSISKTVSALYPFWTS
LQTLEGGSLSEAQPLPSAVCVEKLESSERVTGLVYDERMMEHHNMWDSHHPELPQRIFRI
FSHHDDLGLVARCRRIPARLATEQELALCHGSEHIATIKSTEQMKPRDLNRLGHEYNSIY
ISKESYKCALLAAGACFNVAQAILTGQVRNGVAIVRPPGHHAEKDAACGFCFFNTAALTA
RYAQSITHNALRVLILDWDVHHGNGTQHIFENDDSVLYISLHRYEDGSFFPCSEDADYDK
VGRGKGKGYNVNIPWNKAKMGDVEYLAAFHHLVMPIAREFAPELVLVSAGFDAAQGDPLG
GYKVTPEGYAHLTHQLLSLAAGRVLVILEGGYNLTSISNSMAMCTSMLLGDTPPPLPPLP
PPHQSAAISINNVLRAHAPYWRSLRIQLPEALRLSLPSPKSKIKRTPPGKERNSPPLVTP
QTQSQRTPVPTSPASPPTDQEDSGLDELTQGLHALDLSTSTISATSSPTSVQVGGARPKV
KPSPQRSSFSSAQEASPVRAAEKGIEDGAVKAESTPVKQENQSEESGAGAVCDQESPALE
GACGYTKKTNFELVCGATNTAGDTMYVVDPLTWCPHLESVCPVPAGGIDVFRPCEECGAE
AENWICLCCYKVLCGRFVNEHMVVHGLVSSHPLVLSFADLSVWCYSCESYVHNKVLYEAK
NAAHLAKFGEEIPPIV
NT seq
3291 nt
NT seq
+upstream
nt +downstream
nt
atggattctacatcagaccgaactccgaaaggttcgcaacgctctccaaagaaaacccca
cagagctctggcaagcgggaaaagcgcaaccagaaaccaaaccttcaggaggtgaggaat
aaaggaagacgtgaccgaggcaaagcagaagaggagatgacaaaaaaaaacatggatccg
cacgagaagccgaaagcagtgggaaccggcctggtttactccgagctcttttcccgttat
cgctgtctgtgggactccagtcaccccgagtgtcccgagagagtgactactgtcatgggg
atgatggagaccgaggggctgctgtctcgatgcctgcaggtggaggcgagagctgcatca
gacgacgagctctctcaggttcacacgagggaatacatcgatctgatgaggtccaccgag
aagatgacggaggaggagctgaagtgcgtctctgatcgctacgactccgtctacctccat
ccagacatgttctcatgtgcctgtctagctgccggctctgtcctccagctggtcgacaag
gtgatgacatcagagctacgcaacggcttcgccgtgtgcaggcctccaggacatcatgcc
caggccgagcagatgaatggatactccatgtttaataacgtagcagtggcagcgcgttac
gctcagaaccaacacggtgtccagagggttctgattgtggactgggatgtgcatcacggt
cagggaatccagtacgccttccaggaagatcccagcgtcctgtatttctctgtacatcgg
tacgaggggggctccttctggcctcacctgcccgagggagacagcagtgctgtgggttca
ggaccaggcgaaggctacaacatcaacgtgccctggatcaagactgggatggaggacgga
gattacatcgctgctttccagacaattctgatgcccgtagcctacgagtttcagcctcag
ctcgtgttagtagcagccggttttgactccgtagctggtgatcccaagggtgagatgtgt
gcgagcccacagtgtttctctgtactgacccacatgctgatgggtctggccgagggacgc
atcgtgctctctttggagggaggctacaacctgcaggccacagcagagggggcatgttct
agcttgaggtcactcttgggtgacccctgccctcatctgaactcaccaggggctccgagc
gagagtgcattgacgtccatctctaagacagtttctgctctctatccattttggaccagc
ttgcagactctggagggaggctctctttccgaggcacagcccttaccctcagccgtgtgt
gtggagaaactggaatcctccgaacgagttaccggactggtttacgacgagcgtatgatg
gagcatcacaacatgtgggacagccatcaccctgaactccctcagagaattttccggatc
ttctcccaccatgatgatttggggctcgtggcccgttgccggcggataccggctcgttta
gccacagagcaggagcttgcactttgtcatggatcagaacacatcgctaccataaagagc
accgagcagatgaagcccagagatctgaacagactcgggcacgaatataattccatctac
atcagtaaagagagctataaatgtgcactgctggcagctggagcatgttttaatgtagct
caggccatcctcactggccaggtgaggaacggcgttgcgattgtacgtccacccgggcat
cacgcagagaaagacgccgcctgcggcttctgcttcttcaacacggctgccctgactgct
cgctatgcccagagcattacccacaatgccctgcgcgtccttatcctcgactgggatgtg
caccatggcaacggcacacagcacatctttgagaacgatgacagcgttctctacatctct
ctccatcgctacgaggacggctcgttcttcccttgctcggaggacgccgattacgataaa
gtgggccgagggaaaggtaagggttacaacgtcaacattccctggaacaaagccaagatg
ggcgacgtggaatatctagcagccttccaccacttggtgatgccaatagcacgagagttt
gctccagagctggtcctcgtctcggccgggttcgatgccgcccaaggtgacccactaggg
gggtacaaggtgaccccggagggctacgcccacctcacacaccagctgctgagtctagca
gcaggacgagttcttgtcattttagagggaggttataacctcacctccatctccaactcc
atggcaatgtgcaccagcatgctcctgggtgacacgccgccgccgctgccccctctgccc
ccgccacaccagagcgctgccatcagcatcaacaacgtcctgcgagcacacgccccctac
tggagatctctcagaatacaacttccagaggctctgcgtttgtccttgccttctcctaaa
tctaaaatcaagcgcacaccaccaggaaaagaaagaaattcccctcctcttgttacccct
caaacgcagagccaacgtaccccagtgccgacttcaccagcgtcacctcctaccgatcag
gaggactcggggctggacgagctcacacaaggcctgcacgctctggacctgagcacatcc
accatatctgccacttccagccccacctcggtccaagtgggcggggctagacctaaagtc
aagcccagcccacagaggagctcgttctcatcggcgcaggaagcatcgccggtccgagcg
gcggaaaaaggtatcgaggacggtgccgtaaaagccgagtccacgccggtcaaacaggag
aatcagtcagaagaatcaggcgctggagcggtgtgcgatcaggagagtcctgctctggag
ggagcgtgcggttacaccaagaaaaccaacttcgagcttgtgtgtggagccacgaacacg
gccggggatacgatgtacgtggtggaccctttgacatggtgcccacacttggagtcagtg
tgtccggtgcccgcgggcggcatcgacgtgttccggccgtgcgaggagtgcggcgccgaa
gcggagaactggatctgcctctgctgctataaggttttgtgtgggcgttttgtgaacgag
cacatggtggtccacggtctggtgtcctctcaccctctggtgctgagcttcgccgatctt
tcagtgtggtgctactcctgcgagtcctacgtccacaacaaggtgctgtatgaagccaag
aacgctgctcatcttgctaagttcggggaggagatcccccccatcgtctaa
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integrated database retrieval system
